| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3258 |
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| Symbol | |
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| ID | 8120886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3705759 |
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| End bp | 3707402 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644853636 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_003005557 |
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| Protein GI | 251790836 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000853495 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATA AACCGTTTTA TTACCAAGAT CCGTTTCCAT TAGCGAAAGA TAAAACCGAA
TACCGTTTAA TCAGCAGCGA CTTTGTTTCC GTCAGCCAGT TTGAAGGCCA GGATATTCTC
AAAGTCGACC CGCAGGGGCT GACCTTGCTG GCTCAGCAGG CATTCCACGA CGCCTCTTTC
CTGCTGCGCC CTTCCCACCA GCAACAGGTC GCCGATATTC TGCATGACCC ACAAGCCAGC
GAAAACGACC GTTATGTCGC GCTGCAGTTC CTGCGTAACT CCGAAATCGC CGCCAAAGGC
ATCCTGCCGA CCTGTCAGGA TACCGGCACC GCCATCATCG TCGGCAAAAA AGGCCAGCGC
GTGTGGACCA ACGGCAACGA TGCCGAAGCG CTGTCGCACG GGGTTTACAA CACCTTTATC
GAAGACAACC TGCGCTATTC CCAGAACGCG GCGCTGGATA TGTACAAAGA GGTCAACACC
GGCACCAACC TGCCGGCGCA GATAGACCTC TACAGCACCG AAGGCGATGA ATATAAATTC
CTGTTCGTCA CCAAAGGCGG CGGTTCCGCC AACAAGACCT ACCTGTATCA GGAAACCAAA
GCGCTGTTGT CACCGGGCAA GCTGACCAAC TATCTGGTGG AAAAAATGCG TACGCTGGGC
ACCGCGGCTT GCCCGCCGTA CCACATTGCC TTCGTCATCG GCGGCACCTC GGCGGAAACC
AACCTGAAAA CCGTTAAGCT GGCTTCCACC CGCTACTACG ACGAACTGCC GACCGAAGGC
AACGAGCATG GTCAGGCGTT CCGCGACGTG GCGCTGGAGC AGGAACTGCT GGAAGAAGCC
CGCAATCTGG GGCTCGGCGC CCAGTTCGGC GGTAAATACT TCGCCCACGA TGTGCGGGTG
ATCCGTCTGC CGCGTCACGG CGCTTCCTGC CCGATCGGCA TGGGCGTGTC CTGCTCGGCA
GACCGCAACA TCAAAGCCAA GATCAACCGT CAGGGCATCT GGCTGGAACA GTTGGAAACC
AACCCCGGCA AATACATTCC GGAACACCTG CGTCAGGCCG GCGAAGGCGA AGTGGTTCGC
ATCGACCTGA ACCGCCCGAT GGCCGATATT CTCAAGACGC TGTCGCAGTA CCCGGTTTCC
ACCCGCTTGT CGCTGAACGG CACCATCATC GTGGCGCGCG ACATTGCGCA CGCCAAGCTG
AAGGAATTGC TGGACAACGG CGGCGAACTG CCGCAATACG TGAAAGATCA TCCGATCTAT
TACGCCGGCC CGGCCAAAAC GCCGGAAGGC TATGCCTCTG GTTCGCTCGG CCCGACGACC
GCTGGCCGAA TGGACTCCTA TGTTGACCTG CTGCAATCCC ACGGCGGCAG CATGATCATG
CTGGCCAAAG GCAACCGTAG CCAGCAGGTC ACCGACGCCT GTCATAAACA CGGCGGCTTC
TATCTCGGCA GCATCGGCGG CCCGGCGGCG ATTCTGGCGC AGAACAGCAT CAAGAGCCTG
GAATGCGTGG AATACCCGGA ACTGGGTATG GAAGCTATCT GGAAAATCGA AGTGGAAGAC
TTCCCGGCCT TCATTCTGGT GGATGACAAA GGCAACGACT TCTTCCAGGT GATCCAGTCG
CAGAAATGCA CCCGCTGCGG TTGA
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| Protein sequence | MSNKPFYYQD PFPLAKDKTE YRLISSDFVS VSQFEGQDIL KVDPQGLTLL AQQAFHDASF
LLRPSHQQQV ADILHDPQAS ENDRYVALQF LRNSEIAAKG ILPTCQDTGT AIIVGKKGQR
VWTNGNDAEA LSHGVYNTFI EDNLRYSQNA ALDMYKEVNT GTNLPAQIDL YSTEGDEYKF
LFVTKGGGSA NKTYLYQETK ALLSPGKLTN YLVEKMRTLG TAACPPYHIA FVIGGTSAET
NLKTVKLAST RYYDELPTEG NEHGQAFRDV ALEQELLEEA RNLGLGAQFG GKYFAHDVRV
IRLPRHGASC PIGMGVSCSA DRNIKAKINR QGIWLEQLET NPGKYIPEHL RQAGEGEVVR
IDLNRPMADI LKTLSQYPVS TRLSLNGTII VARDIAHAKL KELLDNGGEL PQYVKDHPIY
YAGPAKTPEG YASGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACHKHGGF
YLGSIGGPAA ILAQNSIKSL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQVIQS
QKCTRCG
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