Gene Dd1591_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3142 
Symbol 
ID8121007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3581492 
End bp3584050 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content58% 
IMG OID644853519 
ProductDNA mismatch repair protein MutS 
Protein accessionYP_003005443 
Protein GI251790722 
COG category[L] Replication, recombination and repair 
COG ID[COG0249] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01070] DNA mismatch repair protein MutS 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAC CAGAGAGTTT AGACGCCCAC ACCCCAATGA TGCAGCAGTA CCTGAAGCTA 
AAAGCCCAGC ATCCCGATAT TTTGCTGTTT TACCGCATGG GCGACTTCTA TGAGCTGTTT
TATGACGATG CCCGGCGTGC GTCGCAATTA CTGGATATCT CGCTCACCAA ACGCGGCGCT
TCCGCCGGCG AACCGATTCC GATGGCCGGT GTCCCTCATC ATGCAGTAGA AAACTATCTG
GCCAGACTGG TGCAGTTGGG TGAATCGGTC GCGATTTGCG AACAGATTGG CGACCCGGCC
ACCAGCAAGG GGCCGGTAGA CCGCAAAGTT GTCCGCATCG TCACCCCCGG CACCATCAGT
GATGAAGCGC TGTTACAGGA AAAGCAGGAT AACCTGCTGG CGGCCATCTG GCAGGAAAAC
CGGGGATTTG GGTACGCTAC GCTGGATATC AGCTCCGGTC GCTTCCGGCT GGTGGAGCCG
GTTGATAGGG AAACTATGGC GGCCGAGTTG CAGCGCACCA ATCCGGCGGA ACTGCTTTAT
CCGGAAACCT TCGAGGCGAT GCCCTTGATT GAGCACCGCC ACGGGTTGCG TCGCCGTCCG
TTGTGGGAAT TCGAGCTTGA TACCGCTCGC CAGCAGTTAA ACCTGCAATT CGGCACCCGC
GACCTGACCG GTTTCGGTGT CGAGCAGGCC CGGCTGGGGT TACGTGCGGC CGGTTGCCTG
TTGCAGTACG CCAAAGATAC CCAGCGCACA TCGCTGCCGC ATATCCGCGG CATCACCATG
GAACGCCAGC AAGACGGCAT CATTATGGAT GCGGCGACCC GCCGTAATCT GGAACTGACG
CAGAACCTGT CTGGTGGCGT CGACAACACA CTGGCTTCCG TACTGGATCG TACCGTCACG
CCAATGGGCA GCCGTATGCT CAAGCGTTGG CTACACACCC CCATTCGAGA CACTCAGGCG
CTGCTGCTGC GTCAACAGGC CATCGGCGCA CTGCAGGATA TTGCCGCCGA GCTGCAACCG
TTTTTGCGTC AGGTCGGCGA TCTGGAGCGT ATTCTGGCGC GTCTGGCGTT ACGTTCCGCA
CGCCCGCGTG ATTTGGCCAG AATGCGTCAC GCGTTTCAGC AACTGCCGGA TATCCACTCC
CTGCTGGAAA CAGTCAACGC CGACGCGGTA CAACAGTTGC GCGCGCAGGT CGGCCATTTC
GATGAACTGC GCGACCTGCT GGAACGCGCG GTGGTGGAAG CGCCGCCAGT GCTGGTGCGC
GATGGCGGCG TTATCGCCGG CGGCTACAAC GACGAGCTGG ATGAGTGGCG TATGCTGGCC
GACGGCGCCA GCGACTATCT GGAAAAGCTG GAAATCCGTG AACGTGACCG ACTCGGCATC
GATACCCTGA AAGTCGGCTT CAACGGTGTG CACGGTTACT ATATTCAGGT TAGCCGTGGG
CAAAGCCACA TGGTGCCGAT GAACTATGTC CGCCGCCAAA CGCTCAAAAA CGCCGAGCGT
TACATCATTC CCGAACTGAA AGAATACGAA GATAAAGTAC TGACCTCAAA AGGCAAAGCG
TTAGCACTGG AAAAAGCGCT GTATGAGGAA TTGTTCGACT TGTTACTGCC GCACCTGGCG
GAACTCCAGC AAAGCGCCGG CGCACTGGCG GAACTGGATG TGCTCAGCAA TCTGGCCGAA
CGTGCCGACA CACTGAATTA CGTCTGCCCG ACATTGAGCG ACAAGCCGGG GATCAAGATC
ACCGGTGGTC GCCACCCGGT GGTAGAGCAG GTACTGAGCG AGCCGTTTAT TGCCAACCCG
TTATCACTGT CGCCCCAGCG CCGGCTGTTG ATCATCACCG GTCCTAACAT GGGCGGTAAA
AGCACCTATA TGCGGCAAGC GGCATTGATC GTGCTGATGG CGCATATCGG TAGTTACGTC
CCGGCCGAAC AGGCGGTGAT TGGCCCGGTT GACCGAATAT TCACTCGCGT CGGGGCCGCC
GATGACCTCG CCTCCGGTCG CTCAACCTTC ATGGTGGAAA TGACGGAAAC CGCCAATATT
CTGCATAACG CCACTGAACA CAGCCTGGTG CTGATGGATG AAATCGGGCG CGGCACCTCC
ACCTATGATG GTTTGTCGCT GGCCTGGGCC TGTGCTGAAG CACTGGCAAA CAACATCAAA
GCCATGACGC TGTTCGCCAC CCACTATTTC GAACTCACCA ACCTGCCGGA GAAAATGGAA
GGTGTCATCA ACATCCATCT CGACGCATTG GAACACGGCG ACACGATTGC TTTTATGCAT
AGCGTGCAGG AAGGCGCAGC CAGCAAGAGT TACGGATTGG CGGTTGCCGC ACTGGCCGGC
GTACCGAAAG AGGTCATCAA ACGGGCCAGA CAAAAACTGA GGGAGTTGGA ATCGCTGGCC
GGTCATGCGT CCGCCAGCCA TGTCGATGGT TCGCAGCTTG CGCTGCTCGC GCCAGTCGAG
CCGTCACCGG CAATGGAGGC GCTGGAATCT ATCGACCCGG ATACACTGAC GCCGCGTCAG
GCGCTGGATT GGCTGTATAA ATTAAAAGGT ATGCTGTAA
 
Protein sequence
MSTPESLDAH TPMMQQYLKL KAQHPDILLF YRMGDFYELF YDDARRASQL LDISLTKRGA 
SAGEPIPMAG VPHHAVENYL ARLVQLGESV AICEQIGDPA TSKGPVDRKV VRIVTPGTIS
DEALLQEKQD NLLAAIWQEN RGFGYATLDI SSGRFRLVEP VDRETMAAEL QRTNPAELLY
PETFEAMPLI EHRHGLRRRP LWEFELDTAR QQLNLQFGTR DLTGFGVEQA RLGLRAAGCL
LQYAKDTQRT SLPHIRGITM ERQQDGIIMD AATRRNLELT QNLSGGVDNT LASVLDRTVT
PMGSRMLKRW LHTPIRDTQA LLLRQQAIGA LQDIAAELQP FLRQVGDLER ILARLALRSA
RPRDLARMRH AFQQLPDIHS LLETVNADAV QQLRAQVGHF DELRDLLERA VVEAPPVLVR
DGGVIAGGYN DELDEWRMLA DGASDYLEKL EIRERDRLGI DTLKVGFNGV HGYYIQVSRG
QSHMVPMNYV RRQTLKNAER YIIPELKEYE DKVLTSKGKA LALEKALYEE LFDLLLPHLA
ELQQSAGALA ELDVLSNLAE RADTLNYVCP TLSDKPGIKI TGGRHPVVEQ VLSEPFIANP
LSLSPQRRLL IITGPNMGGK STYMRQAALI VLMAHIGSYV PAEQAVIGPV DRIFTRVGAA
DDLASGRSTF MVEMTETANI LHNATEHSLV LMDEIGRGTS TYDGLSLAWA CAEALANNIK
AMTLFATHYF ELTNLPEKME GVINIHLDAL EHGDTIAFMH SVQEGAASKS YGLAVAALAG
VPKEVIKRAR QKLRELESLA GHASASHVDG SQLALLAPVE PSPAMEALES IDPDTLTPRQ
ALDWLYKLKG ML