| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3097 |
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| Symbol | tgt |
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| ID | 8117795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3529477 |
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| End bp | 3530640 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644853474 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003005398 |
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| Protein GI | 251790677 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.141745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTACG AACTGTTGCA AACGGACGGC CGCGCGCGTC GCGGTCGTCT GGTTTTTGAA
CGTGGTGTGG TGGAAACCCC GGCTTTTATG CCGGTCGGCA CCTATGGCAC CGTTAAGGGC
ATGACGCCGG AAGAAGTTAA AGACACCGGC GCTCAGATCA TTCTGGGCAA CACGTTTCAC
CTGTGGTTAC GCCCGGGGCA GGAAATCATG AAACGGCACG GCGACCTGCA TGATTTTATG
CAGTGGCATG GTCCGATCCT GACTGACTCC GGCGGTTTTC AGGTTTTTAG TCTCGGGGAT
ATCCGCAAGA TCACGGAAGA AGGCGTACAT TTCCGTAATC CGATCAATGG CGACGCTATT
TTCCTGAGCC CGGAAAAATC CATGGAAATT CAGTACGATC TCGGTTCCGA TATCGTGATG
ATTTTCGACG AATGTACGCC GTATCCCGCC GATTGGGATT ACGCCAAGCG GTCGATGGAA
ATGTCGTTGC GCTGGGCGAA GCGCAGCCGT CAGCGTTTTG ACGAATTAAG CAACAAAAAC
GCGCTGTTCG GCATCGTTCA GGGCAGTGTT TACGAAGATT TACGTGATGT GTCGGTAAAA
GGTCTGGTAG ACATCGGTTT TGATGGTTAC GCTGTGGGCG GCCTCGCGGT CGGCGAGCCG
AAGGCCGATA TGCACCGCAT TCTGGAGCAT GTCTGCCCGC AGTTGCCGAC GGATAAACCC
CGCTATCTGA TGGGGGTGGG TAAACCGGAA GATTTGGTGG AAGGGGTACG CCGCGGTATC
GATATGTTTG ATTGCGTGAT GCCGACCCGT AACGCCCGTA ACGGCCATCT GTTCGTGACG
GACGGCGTGG TCAAGATCCG TAATGCCCGG CATAAAGACG ACACCGGACC GCTGGATGAG
CACTGTGATT GCTACACGTG TCGCAATTAT AGCCGCGCCT ACTTGCACCA CCTTGACCGT
TGTAACGAAA TACTCGGCGC GCGCCTCAAT ACCATCCATA ACCTGCGCTA TTATCAACGC
CTGATGGCGG GTTTACGTCA GGCTATCGAG GAAGGTAGAT TAGAGAGCTT TGTGACCGAG
TTTTATCAGC GCATCGGTAA ACCGGTTCCG CCGTTGGTCG ACAAGGCGGC GGGAGATGAC
CATGAAGGTC ATGTGCCGCA ATAA
|
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| Protein sequence | MKYELLQTDG RARRGRLVFE RGVVETPAFM PVGTYGTVKG MTPEEVKDTG AQIILGNTFH
LWLRPGQEIM KRHGDLHDFM QWHGPILTDS GGFQVFSLGD IRKITEEGVH FRNPINGDAI
FLSPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR QRFDELSNKN
ALFGIVQGSV YEDLRDVSVK GLVDIGFDGY AVGGLAVGEP KADMHRILEH VCPQLPTDKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAR HKDDTGPLDE
HCDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRQAIE EGRLESFVTE
FYQRIGKPVP PLVDKAAGDD HEGHVPQ
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