Gene Dd1591_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3072 
SymbolampG 
ID8117770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3502431 
End bp3503900 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content54% 
IMG OID644853449 
Productmuropeptide transporter 
Protein accessionYP_003005373 
Protein GI251790652 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000553099 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGTC GCCTTTTTTC GCTTTTCCGT GAACGTAACA ATACCGCACT GCTGATTTTA 
GGGTTTGCTT CAGGTCTTCC CCTGGCACTC ACTTCCGGCA CGTTACAGGC ATGGATGACG
GTGGAAAACG TCGATCTGAA AACCATCGGG TTCTTCTCTC TGGTGGGTCA GGCTTATGTA
TTCAAGTTTC TGTGGTCACC GTTGATGGAT CGCTACACGC CACCGTTTAT GGGGCGCCGC
CGCGGTTGGT TGCTGGTGAC GCAGTTGTCG CTGGCGGCGG CGATCCTCTT TATTGGTACG
CTGAACCCGT CTCAACATTT ATGGTGGCTG GCGCTATTGG CGGTCATCAT CGCGTTCTGT
TCCGCCTCGC AGGACATCGT ATTTGATGCG TACAAGACCG ACTTATTACT ACCAGAGGAA
CGCGGCAGCG GCGCGGCTAT TTCCGTGCTG GGCTATCGCC TGGCCATGTT AGTCTCCGGC
GGTCTGGCAC TATGGGTTGC CGATCGTTTT CTCGGCTGGC ACGCCACCTA CTGGTTGATG
GCGGCCCTCT TGTTGCTGTG CACGCTGGCG ACCTGGTTAT CTCCGGAACC GGTCGTTAGC
GAACCCGCGC CACGCTCTCT TGAACAGGCG ATCTTCGCGC CGCTGAAAGA TTTTTTCAGC
CGCAATGATG CCTGGCTGAT TTTGATGTTG ATTGTGCTGT ACAAACTGGG GGATGCCTTC
GCCGCCAGCC TCAGCACCAC TTTTTTGATT CGAGGAGTGG GCTTCAATCC AGGCGAAGTC
GGATTAGTCA ACAAGACTCT CGGCCTGTTC GCCACTATCA TCGGCGCGTT GTACGGCGGG
GTGTTGATGC AGCGCTGGAC GCTGTTTCGC TCATTGATGT TATTTGGTCT GCTACAAGCC
GTATCAAATG CCGGTTACTG GTTGCTGGCT ATCACCGACA AACAATTATT CACCATGGCG
TCGGCGGTAT TTCTGGAAAA CCTCTGCGGC GGCATGGGAA CTGCCGCGTT CGTAGCGCTG
CTGATGGCGC TTTGTAATAA ATCGTTTTCT GCAACCCAGT TTGCCTTGCT ATCGGCCCTT
TCGGCAGTAG GGCGGGTATA CGTTGGCCCA GTTGCCGGCT GGTTTGTAGA GCTGTACGGA
TGGGCATGGT TCTATCTATT TTCGATTATC ATCGCTATTC CAGGGTTGGC CCTGCTGAAT
ATTTGCCGCT CATCGCTGGA ACAAGCGCAG TCAGGCGGCG TATTTCTGCA GCGCAACGCC
TATCCGCGAC TGTATAAGCT GGCATCCCGC CTGTTTTTCA TCGGCTGTGC GCTGTTCGTC
GGCGGCCTGG TCAGTTGGGG GTTACAAGGA TTAGGTTGGC TGGAGAGTTC ATACATCAAA
AACATACTGA TGACGGCAGG CGCAACGCTG GCGGCCCTTG CTATTCTGCT TGGCGGCCTG
CTTGACTATC TGTCTTCACA GCACAACTAA
 
Protein sequence
MFSRLFSLFR ERNNTALLIL GFASGLPLAL TSGTLQAWMT VENVDLKTIG FFSLVGQAYV 
FKFLWSPLMD RYTPPFMGRR RGWLLVTQLS LAAAILFIGT LNPSQHLWWL ALLAVIIAFC
SASQDIVFDA YKTDLLLPEE RGSGAAISVL GYRLAMLVSG GLALWVADRF LGWHATYWLM
AALLLLCTLA TWLSPEPVVS EPAPRSLEQA IFAPLKDFFS RNDAWLILML IVLYKLGDAF
AASLSTTFLI RGVGFNPGEV GLVNKTLGLF ATIIGALYGG VLMQRWTLFR SLMLFGLLQA
VSNAGYWLLA ITDKQLFTMA SAVFLENLCG GMGTAAFVAL LMALCNKSFS ATQFALLSAL
SAVGRVYVGP VAGWFVELYG WAWFYLFSII IAIPGLALLN ICRSSLEQAQ SGGVFLQRNA
YPRLYKLASR LFFIGCALFV GGLVSWGLQG LGWLESSYIK NILMTAGATL AALAILLGGL
LDYLSSQHN