Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3072 |
Symbol | ampG |
ID | 8117770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3502431 |
End bp | 3503900 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644853449 |
Product | muropeptide transporter |
Protein accession | YP_003005373 |
Protein GI | 251790652 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000553099 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGTC GCCTTTTTTC GCTTTTCCGT GAACGTAACA ATACCGCACT GCTGATTTTA GGGTTTGCTT CAGGTCTTCC CCTGGCACTC ACTTCCGGCA CGTTACAGGC ATGGATGACG GTGGAAAACG TCGATCTGAA AACCATCGGG TTCTTCTCTC TGGTGGGTCA GGCTTATGTA TTCAAGTTTC TGTGGTCACC GTTGATGGAT CGCTACACGC CACCGTTTAT GGGGCGCCGC CGCGGTTGGT TGCTGGTGAC GCAGTTGTCG CTGGCGGCGG CGATCCTCTT TATTGGTACG CTGAACCCGT CTCAACATTT ATGGTGGCTG GCGCTATTGG CGGTCATCAT CGCGTTCTGT TCCGCCTCGC AGGACATCGT ATTTGATGCG TACAAGACCG ACTTATTACT ACCAGAGGAA CGCGGCAGCG GCGCGGCTAT TTCCGTGCTG GGCTATCGCC TGGCCATGTT AGTCTCCGGC GGTCTGGCAC TATGGGTTGC CGATCGTTTT CTCGGCTGGC ACGCCACCTA CTGGTTGATG GCGGCCCTCT TGTTGCTGTG CACGCTGGCG ACCTGGTTAT CTCCGGAACC GGTCGTTAGC GAACCCGCGC CACGCTCTCT TGAACAGGCG ATCTTCGCGC CGCTGAAAGA TTTTTTCAGC CGCAATGATG CCTGGCTGAT TTTGATGTTG ATTGTGCTGT ACAAACTGGG GGATGCCTTC GCCGCCAGCC TCAGCACCAC TTTTTTGATT CGAGGAGTGG GCTTCAATCC AGGCGAAGTC GGATTAGTCA ACAAGACTCT CGGCCTGTTC GCCACTATCA TCGGCGCGTT GTACGGCGGG GTGTTGATGC AGCGCTGGAC GCTGTTTCGC TCATTGATGT TATTTGGTCT GCTACAAGCC GTATCAAATG CCGGTTACTG GTTGCTGGCT ATCACCGACA AACAATTATT CACCATGGCG TCGGCGGTAT TTCTGGAAAA CCTCTGCGGC GGCATGGGAA CTGCCGCGTT CGTAGCGCTG CTGATGGCGC TTTGTAATAA ATCGTTTTCT GCAACCCAGT TTGCCTTGCT ATCGGCCCTT TCGGCAGTAG GGCGGGTATA CGTTGGCCCA GTTGCCGGCT GGTTTGTAGA GCTGTACGGA TGGGCATGGT TCTATCTATT TTCGATTATC ATCGCTATTC CAGGGTTGGC CCTGCTGAAT ATTTGCCGCT CATCGCTGGA ACAAGCGCAG TCAGGCGGCG TATTTCTGCA GCGCAACGCC TATCCGCGAC TGTATAAGCT GGCATCCCGC CTGTTTTTCA TCGGCTGTGC GCTGTTCGTC GGCGGCCTGG TCAGTTGGGG GTTACAAGGA TTAGGTTGGC TGGAGAGTTC ATACATCAAA AACATACTGA TGACGGCAGG CGCAACGCTG GCGGCCCTTG CTATTCTGCT TGGCGGCCTG CTTGACTATC TGTCTTCACA GCACAACTAA
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Protein sequence | MFSRLFSLFR ERNNTALLIL GFASGLPLAL TSGTLQAWMT VENVDLKTIG FFSLVGQAYV FKFLWSPLMD RYTPPFMGRR RGWLLVTQLS LAAAILFIGT LNPSQHLWWL ALLAVIIAFC SASQDIVFDA YKTDLLLPEE RGSGAAISVL GYRLAMLVSG GLALWVADRF LGWHATYWLM AALLLLCTLA TWLSPEPVVS EPAPRSLEQA IFAPLKDFFS RNDAWLILML IVLYKLGDAF AASLSTTFLI RGVGFNPGEV GLVNKTLGLF ATIIGALYGG VLMQRWTLFR SLMLFGLLQA VSNAGYWLLA ITDKQLFTMA SAVFLENLCG GMGTAAFVAL LMALCNKSFS ATQFALLSAL SAVGRVYVGP VAGWFVELYG WAWFYLFSII IAIPGLALLN ICRSSLEQAQ SGGVFLQRNA YPRLYKLASR LFFIGCALFV GGLVSWGLQG LGWLESSYIK NILMTAGATL AALAILLGGL LDYLSSQHN
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