Gene Dd1591_3064 details

Gene Information

• Locus tag: Dd1591_3064
• ID: 8117762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 3491978
• End bp: 3493858
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644853441
• Product: peptidyl-prolyl cis-trans isomerase (rotamase D)
• Protein accession: YP_003005365
• Protein GI: 251790644
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGACA ATTTACGCGC GGCCGCTAAC AACGTCGTGC TGAAAATTAT TCTTGCCTTG 
ATTATTGGTT CGTTCGTGTT GACCGGTGTG GGGGATTACC TGATTCGAGG TTCAGGTGAT 
TACGCGGCCA AAGTGAATGG GCAGGAGATT ACCCGGTCTC AGCTTGAGCA AGGGGTACAG 
AATGAGCGCA GTCGCCAGCA GGAAATGCTG GGAGATAATT TCTCTGCACT GGCCGCGAAC 
GAAGGGTATA TGCAGCAGTT GCGCGGGCAG GTGTTGTCGC AACTGGTCGA TGAAACGCTG 
GTTGTGCAGT ATGCCCATAA TCTGGGGCTA AATATTAGCG ACGAGCAGGT CAAACAGGCG 
ATTTTCTCCG TACCCGAATT TCAGACCAAT AACCGGTTTG ATAATGAAAA ATATCTGTCG 
CAGGTGCGTC AACTGGGCCT AACCCCAGAT GCGTATGCAC AGTTCCTGCG TAAACAGTTA 
TTGACTCAGC AGTTGATTCG CGGGTTGGGC AATACCGACT TCGTATTGCA GCAGGAGCTT 
GATAACCTGG TGGCGATAGC GGCGCAAGAT CGTACCGTTC GTACGGCAAC TATTGATCTC 
GGCGCACGAG TCAAGAGCCA GGCTGTTTCT GATGAAGAAG TAAAAAATTT CTATGATCAG 
AACAAAGCGC GTTATCTGGC GCCGGAGCAG TTCAAAGTCA GTTATATCAT GCTGGATGCG 
GCGTCTATCA TGGATAAAAC CAAGGTAGAT GGTAATGATA TCGCTGCCTA CTATGAACAG 
CATAAAAGTG AATTCACTCA GCCGGAACGT AAGAAGTACA GTGTTATTCA GTTGAAAACC 
GAGGCAGATG CCAAGGCTGT TCTGGAACAG TTGAAGAAAG GCGCGGATTT CGCTGCGTTG 
GCCAAAGACA AATCCACCGA CATTGTTTCC CGTCGTAATG GCGGTGATCT TGGATGGATG 
GACGATGGCT CTACCGTCGA TGAAATCAAG CAGGCTGGGC TGAAGCAGAA AGGCCAAGTG 
TCGGATGTCG TTAAATCTTC AGTCGGTTAC CTGATCATTC GTTTGGATGA TGTCCAGGCG 
CAGCACGTTA AGGAGTTGGA TGAGGTTCGT GCCGATTTGT CTGAAAAGGT AAAACGCGAG 
AAGGCGCTGG ATGCATTTTA TTCCTTGCAG CAGAAGCTCA GTGAAGCTGC CAGCAACGAT 
AATGAGTCGC TGGCTTCAGT TGAGAAAGTC GCCAATATCA AATCCGTTCA GACTGATTGG 
TTTACGCGTG ATAATGTTCC CGCCGCACTG AACTTCCAGC CGGTTACTCA GGCTATTTTG 
GGCGGCTCTC TGGTGGGTGA GAACGGCACG CCGGGTAATA ACTCGGATGT GATTAGCGTG 
GAAGGCGATC GTGCATTTGT CTTGCGTGTA ACCGAGCATA AACCGGAAAC GACCCAACCG 
TTGGATCAGG TGCGTGAGCA AGTCGTACAG TCGCTGAAAC GCCAGAAAGC CGAACAGCAA 
GCCAAAGTGG AAGCCGAAAA GATTCTGGCT GATCTCTACC AGGGTAAAAC CGATAGCATG 
GCCGCTGCTG GCTTGAGTTT CAGTGCAGCA AAAGAGATGT CCTCTATGGG GCAAACCGAT 
GCACTGGCAG AAACCGTGTT TGCGATGGCG CAACCGAAGA AAGATAAGCC GTCTTACGCC 
GTAGCTCAGG ATCAATCCGG GAATATCGTA CTGATAGTGT TGGATGCCGT GAAACCTCAT 
GTGTTACCTG ACGCTCAGAA GAAACAATTC GGCGCTCAGA TTGAACAGAG TAACGTTGGT 
GCGCTGTTTG ATACACTGAT GACCAGCCTG CGCAGTCAGG CGAAGATCAA GTACGGTAAC 
GCTGCACAAG AAGTGCAGTA A 

 

Protein sequence

MMDNLRAAAN NVVLKIILAL IIGSFVLTGV GDYLIRGSGD YAAKVNGQEI TRSQLEQGVQ 
NERSRQQEML GDNFSALAAN EGYMQQLRGQ VLSQLVDETL VVQYAHNLGL NISDEQVKQA 
IFSVPEFQTN NRFDNEKYLS QVRQLGLTPD AYAQFLRKQL LTQQLIRGLG NTDFVLQQEL 
DNLVAIAAQD RTVRTATIDL GARVKSQAVS DEEVKNFYDQ NKARYLAPEQ FKVSYIMLDA 
ASIMDKTKVD GNDIAAYYEQ HKSEFTQPER KKYSVIQLKT EADAKAVLEQ LKKGADFAAL 
AKDKSTDIVS RRNGGDLGWM DDGSTVDEIK QAGLKQKGQV SDVVKSSVGY LIIRLDDVQA 
QHVKELDEVR ADLSEKVKRE KALDAFYSLQ QKLSEAASND NESLASVEKV ANIKSVQTDW 
FTRDNVPAAL NFQPVTQAIL GGSLVGENGT PGNNSDVISV EGDRAFVLRV TEHKPETTQP 
LDQVREQVVQ SLKRQKAEQQ AKVEAEKILA DLYQGKTDSM AAAGLSFSAA KEMSSMGQTD 
ALAETVFAMA QPKKDKPSYA VAQDQSGNIV LIVLDAVKPH VLPDAQKKQF GAQIEQSNVG 
ALFDTLMTSL RSQAKIKYGN AAQEVQ