| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3048 |
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| Symbol | |
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| ID | 8117025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3475703 |
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| End bp | 3478846 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644853425 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003005349 |
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| Protein GI | 251790628 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0601242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TTTTCATAGA TCGCCCGATT TTTGCCTGGG TCATCGCCAT TATGGTGATG
CTCACCGGGA CACTGGCAAT CCTGAAGTTG CCTATTGCAC AGTACCCGAC AATTGCTCCG
CCGGCGGTGC AGATCACTGC AAACTACCCG GGTGCAGATG CGAAAACCCT GCAAGATACC
GTCACGCAGG TGATTGAGCA GAACATGAAC GGGATCGACA AATTACTGTA TATGTCTTCT
AACAGTGACT CGTCCGGTAC CGTTCAGATC ACGCTGACAT TTGATGCCGA CGCCAACCCG
GACATCGCTC AGGTACAGGT GCAGAACAAA CTGCAACTGG CGATGCCGTT ACTGCCGCAA
GAAGTGCAGC AGCAAGGCGT TAGCGTGCAA AAATCCAGCA GTAGCTTCCT GATGGTGTTA
GGTTTTGTCA GTGATGACGA CAACATGACC CAGCAGGATA TCTCCGATTT TGTCGGCGCC
AGCATCAAAG ACCCAATCAG CCGTGTACGC GGTGTGGGTG ATACTCAGTT GTTTGGTGCC
CAGTACGCCA TGCGTATCTG GTTGGATCCG GACAAACTGA ACAATTACCA ACTTACGACC
AGCGATGTAG TTTCCGCGAT TCAGGTGCAG AATAACCAGA TCGCCGCCGG CCAGTTAGGC
GGTACGCCGC CGGTTCCAGG CCAGAAACTG AATGCATCGA TTATCGCGCA AACCCGACTG
AATTCACCGG AGCAGTTCGG CAAAATTCTG CTGAAAGTCA ATCAGGATGG TTCGCAGGTC
CGCCTGAATA ACGTTGCCCG CATTGAGCTT GGCGGCGAAA GCTACAGCAC CATCGCTCGT
TATAATGGTC GTCCGGCTTC GGGTCTGGGG ATTAAACTTG CCACCGGTGC CAACGCGCTG
GACACCGCGT CGGCGGTAAA AGCGGAAATC GCCAAATTGC AGTCGACTTT CCCTGCTGGT
CTGAAAGTGG TTTATCCGTA TGACACCACG CCGTTCGTAA AAATCTCTAT TTACGAAGTG
GTGAAAACCC TGCTTGAAGC CATCGTGCTG GTGTTCGTGG TGATGTATCT GTTCTTGCAG
AACTTCCGCG CGACACTGAT TCCCACCATC GCCGTACCGG TAGTGTTGTT GGGAACATTC
GCGATTCTCT CCGCCTTCGG CTATTCGATT AACACCTTGA CGATGTTCGC CATGGTGCTC
GCAATCGGCC TATTGGTGGA TGACGCCATC GTCGTCGTGG AGAACGTAGA ACGTGTCATG
GCGGAAGAGG GGCTGTCGCC CAAAGAGGCC ACGCGCAAAT CGATGGGGCA AATTCAGGGT
GCGCTGGTTG GTATTGCACT GGTGTTGTCT GCCGTATTCA TACCTATGGC GTTTTCAGGG
GGCTCAACCG GGGCTATCTA TCGCCAGTTC TCGATTACCA TCGTTTCCGC CATGGTGTTG
TCGGTACTGG TTGCAATGAT CCTGACACCA GCACTGTGTG CAACCATCCT GAAACCCCTC
GCCAACCACG GCGAGAAAAA AGGCTTCTTC GGTTGGTTCA ACCGCCTTTT TGACAAGAGT
ACCCATCACT ACACCAACAG TGTCGCCAAT ATCCTGCGTA GCACTGGCCG CTATGTCTTT
TTGTACCTGG TTATTGTGGC TGGTTTAGGT CTGCTGTTTA CCCGCATCCC CAGTTCTTTC
CTGCCGCAGG AAGATCAGGG CGTATTACTG ACGATGGTAC AGTTGCCGGT AGGCGCCACT
CAGGAAAGTA CGCAGAAAGT GCTGGATCAG GTGAATGACT ACTATCTGAA CAGCGAAAAA
GACAACGTAA AATCCGTCTT TACCGTTAAC GGCTTCGGTT TTGCCGGCCG CGGTCAGAAC
ATGGGTATCG CTTTCGCCAG TCTGAAAGAT TGGGATGAAC GTTCTGGAGC GGCTAACAAA
GTTGATGCAA TCATCGGTCG TGCTTTTGGC GCCTTCTCAC AAATCAAAGA AGCGATGGTT
ATCCCGTTTA ACCTACCGGC TATCATTGAA CTGGGCACCG CCAGCGGTTT TGACTTTGAA
CTGATCGATC AGAACAACCT CGGCCACGAT AAACTGATCG CTGCCCGTAA CCAATTGCTG
GGCATGATCG CTCAACATCC AGATACGCTG GTGCGTGTTC GTCCCAACGG GATGGAAGAT
ATGCCGCAAT ACCGGCTGGA GATCGATCAT GAAAAAGCCG AATCGCTTGG TGTATCCATT
GCCACCATCA ACTCTACCTT GTCCACCGCT CTCGGGGGCA CCTACGTTAA TGACTTTATT
GATCGCGGTA GGGTGAAAAA GGTGTACGTT CAGGCAGAAG CCAAATTCCG CATGTTGCCT
AACGACATCC AAAAGTGGTA TGTCCGCGGC ACTTCCGGTC AAATGGTTCC TTTCTCCGCC
TTTGCCTCCG CGCACTGGGA ATACGGCTCG CCACGTCTGG AACGTTACAA CGGCCTGCCG
GCAGTTGAGT TGGTGGGTGA AGCGGCCCCT GGTAAGAGTA CCGGGGAAGC GATGGCACTG
ATGGAAGAAC TGGCGGCGCA ATTACCTCCG GGGATCGGAT TCGACTGGAC CGGCATGTCC
TATCAGGAAC GACTGGCAGG TAACCAGGCG CCGGCGCTGA TCATCATCTC CGCTGTCGTC
GTGTTCTTGT GTCTGGCTGC ACTGTATGAA AGCTGGTCAA TCCCCTTCTC CGTAATGCTG
GTTGTACCGC TCGGTGTGTT TGGTGCGGTG GTAGCGGCAG GCTTACGTGG GCTGGAAAAT
GATGTCTACT TTAAGGTCGG CCTGCTGACA ACCATTGGCT TGTCCGCCAA GAACGCCATT
CTGATCGTCG AGTTTGCCAA GGATCTTATG GAGAAAGAAG GAAAAGGCCT GATAGAAGCG
ACGCTGGATG CTGTACGTAT GCGTCTGCGC CCCATTCTGA TGACATCACT GGCATTCATC
CTGGGCGTGG TTCCGCTGGT GTTCAGCACC GGCGCAGGCT CAGGCGCACA GAACGCAGTG
GGTACCGGCG TAATGGGGGG GATGATCACC GCAACAGTAT TGGCCATCTA TTTCGTGCCG
GTATTCTTTG TGGTGGTACG CCGTCGCTTC GGTAAGAAAA AAGAAGCAAA CGAGCCCCAC
GAGCACACCC AGGCCAGTCA CTAA
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| Protein sequence | MAKFFIDRPI FAWVIAIMVM LTGTLAILKL PIAQYPTIAP PAVQITANYP GADAKTLQDT
VTQVIEQNMN GIDKLLYMSS NSDSSGTVQI TLTFDADANP DIAQVQVQNK LQLAMPLLPQ
EVQQQGVSVQ KSSSSFLMVL GFVSDDDNMT QQDISDFVGA SIKDPISRVR GVGDTQLFGA
QYAMRIWLDP DKLNNYQLTT SDVVSAIQVQ NNQIAAGQLG GTPPVPGQKL NASIIAQTRL
NSPEQFGKIL LKVNQDGSQV RLNNVARIEL GGESYSTIAR YNGRPASGLG IKLATGANAL
DTASAVKAEI AKLQSTFPAG LKVVYPYDTT PFVKISIYEV VKTLLEAIVL VFVVMYLFLQ
NFRATLIPTI AVPVVLLGTF AILSAFGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
AEEGLSPKEA TRKSMGQIQG ALVGIALVLS AVFIPMAFSG GSTGAIYRQF SITIVSAMVL
SVLVAMILTP ALCATILKPL ANHGEKKGFF GWFNRLFDKS THHYTNSVAN ILRSTGRYVF
LYLVIVAGLG LLFTRIPSSF LPQEDQGVLL TMVQLPVGAT QESTQKVLDQ VNDYYLNSEK
DNVKSVFTVN GFGFAGRGQN MGIAFASLKD WDERSGAANK VDAIIGRAFG AFSQIKEAMV
IPFNLPAIIE LGTASGFDFE LIDQNNLGHD KLIAARNQLL GMIAQHPDTL VRVRPNGMED
MPQYRLEIDH EKAESLGVSI ATINSTLSTA LGGTYVNDFI DRGRVKKVYV QAEAKFRMLP
NDIQKWYVRG TSGQMVPFSA FASAHWEYGS PRLERYNGLP AVELVGEAAP GKSTGEAMAL
MEELAAQLPP GIGFDWTGMS YQERLAGNQA PALIIISAVV VFLCLAALYE SWSIPFSVML
VVPLGVFGAV VAAGLRGLEN DVYFKVGLLT TIGLSAKNAI LIVEFAKDLM EKEGKGLIEA
TLDAVRMRLR PILMTSLAFI LGVVPLVFST GAGSGAQNAV GTGVMGGMIT ATVLAIYFVP
VFFVVVRRRF GKKKEANEPH EHTQASH
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