| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2969 |
|---|
| Symbol | |
|---|
| ID | 8118386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3381530 |
|---|
| End bp | 3382264 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644853346 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_003005270 |
|---|
| Protein GI | 251790549 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0168211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTA TCTTGCAACA GGATACGATC ATAGTGCGTA ACACGATCAT CGTACGTCAA
CTGGGCGTAC AGCCTTATGA ACCGGTGTCG CAAGCGATGC ACGCCTTTAC CGAACAACGT
GATGACAGCA GTCTTGACGA GCTATGGCTG GTGCAGCACG AACCTGTGTT TACTCAGGGT
CAGGCGGGCA AAGCCGAACA TGTCCTGATG CCCGGTGATA TCCCGGTCAT TCAGAGTGAT
CGCGGGGGAC AGGTCACTTA TCACGGCCCT GGTCAGCAAG TGATGTATGT GCTGGTCGAT
ATCAAACGCC GTAAAGTGGG GGTACGCCAG TTAGTGACGG CGATCGAGAA TACCGTCATC
AACACGCTAG CGCATTATGC GGTTGATGCC CACGCTCGTG CCGATGCTCC CGGCGTCTAT
GTCGGCGAGA GCAAAATCTG CTCGCTGGGC CTGCGTATCC GCCATGGCTG CTCGTTTCAC
GGCCTGGCGT TGAATGTTGC CATGGATCTG TCTCCGTTCT TGCGAATCAA CCCTTGCGGT
TATGCAGGCA TGGCGATGAC ACAGCTGAGT GAATTCGCCC CTGATGCAAC CGTCACGACT
ACCGCACCGA TCATGGTAAA AGCATTCATG GAACTGCTGG ATTATCCACA ACATGAATGG
TTAGAGTGGA ACTGGCGGCA ACAAGGGGAG CCGCGTCCGT TGAGCGCTAT GCATCACGCC
GCCCAGGAAA CCTAA
|
|---|
| Protein sequence | MMTILQQDTI IVRNTIIVRQ LGVQPYEPVS QAMHAFTEQR DDSSLDELWL VQHEPVFTQG
QAGKAEHVLM PGDIPVIQSD RGGQVTYHGP GQQVMYVLVD IKRRKVGVRQ LVTAIENTVI
NTLAHYAVDA HARADAPGVY VGESKICSLG LRIRHGCSFH GLALNVAMDL SPFLRINPCG
YAGMAMTQLS EFAPDATVTT TAPIMVKAFM ELLDYPQHEW LEWNWRQQGE PRPLSAMHHA
AQET
|
|---|
| |