Gene Dd1591_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2966 
Symbol 
ID8118383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3378486 
End bp3379631 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID644853343 
Productrare lipoprotein A 
Protein accessionYP_003005267 
Protein GI251790546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.508447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAGG ATTGGGTTTG GATTGGTGCG TTCAGCCTGG CTCTGGCTGG TTGTGCTGTC 
ACGGAACAGC CGCAGTCTTC CTCACCGCAG GCTTCGACAT ACAATGGCCC GGTAGAAGAA
ATCGGCGGTG CAGAACCGCG CTATGAACCG TACAACCCTG CCAACATGCA AGATTACAGC
ATGAACGGCA AATCGTACCG TATCGTCAAA AACCCGGAAA ACTTCAGTGA GAGCGGGTTT
GCCGCCTGGC ATGATCGCAA GTCGGTTGGC AACCGCACCG CAACCGGCGA AGAGTTCGAC
GCCAATGCGA TGGCCGCAGC CCATCCTACC CTGCCGATCC CGAGCTATGT GCGTGTCACC
AACCTCAGTA ACGGCCGACG TGTCGTCGTA CGTATCAATG ATCGCGGCCC CTATACGCCG
GGCAGAATTA TTGATCTGAC CAAAGGCGCA GCCGACCGCC TCAATCTTTC CAACAATACC
AAGGTGAAGG TGGACTTCAT CAATGTAGCG CCGGACGGCA CGCTATCCGG CCCGGGGACT
ATCGGCACTC GCGTCGCCAA ACAGAGTTTT GCCTTGCCGT CACGCCCTAC TCTGGGCTCC
AGCGGCATGG GGACACCGAT AATGGAAAGC GCGCCGCCGA GCGCCGCCGC CGTGCGGCCC
ATCAGTAATG CCACGCTGGC GCCGGCTATG GGCAATAGTA CCAGTATGAC TGGCGGCAAT
ATATCGACCG GTACTGCCGG AACAACCACC GGAGGTGGGT TCCTTGGCGC CCCTAAACCG
CTGCCCAGCG GCGTGTTGGA AGGTTCCGAA CCAGCGGCTT CGGCCATCGC GCCCACCCAC
TCGGCGCCGG TTGCCGTGGC ACCTGTGACT GCGCCATCAC GCGCCGCGGC TCAATCGGCT
ATGCCCGCCG GCTCCGGCAA CATCGTGGTG CAGGTCGGTG CACTGAGCGA TCAACAACGG
GCGCAAACCT GGCTGAAGAG TCTGAGCGAG CGTTTCCGCG TGCCGGGCAA AGTCAGCCTA
AATAACGGCT TGTATCGTAT TCAGTTAGGC CCGTTCCAGA GCCGCCAGCA GGCCATCGAC
CTGCAACAGC GCCTGTCCAG CGAAGCGCAA CAGCCATCAT TCGTCACCAC CGTATCCGGT
ATGTAG
 
Protein sequence
MRKDWVWIGA FSLALAGCAV TEQPQSSSPQ ASTYNGPVEE IGGAEPRYEP YNPANMQDYS 
MNGKSYRIVK NPENFSESGF AAWHDRKSVG NRTATGEEFD ANAMAAAHPT LPIPSYVRVT
NLSNGRRVVV RINDRGPYTP GRIIDLTKGA ADRLNLSNNT KVKVDFINVA PDGTLSGPGT
IGTRVAKQSF ALPSRPTLGS SGMGTPIMES APPSAAAVRP ISNATLAPAM GNSTSMTGGN
ISTGTAGTTT GGGFLGAPKP LPSGVLEGSE PAASAIAPTH SAPVAVAPVT APSRAAAQSA
MPAGSGNIVV QVGALSDQQR AQTWLKSLSE RFRVPGKVSL NNGLYRIQLG PFQSRQQAID
LQQRLSSEAQ QPSFVTTVSG M