Gene Dd1591_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2930 
Symbol 
ID8118341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3336488 
End bp3339217 
Gene Length2730 bp 
Protein Length909 aa 
Translation table11 
GC content59% 
IMG OID644853301 
Productsensor protein KdpD 
Protein accessionYP_003005231 
Protein GI251790510 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.770189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG AGGAGCAACA TCGCCCCGAT CCGGACAGCC TGCTGAGCCA GATTGAGGAG 
CAACCACGCG GCAAGCTGAA GATCTTCTTC GGCGCCTGCG CCGGCGTCGG TAAAACCTAC
GCGATGTTGC AGGAAGCGCA ACGCCTGAAA GCGCAAGGGC TGGATGTGCT GGTCGGGGTG
GTGGAAACTC ATGGGCGCAG CGAAACCGCA GCGCTGCTGG CAGGCTTGCC GCACCTGCCG
ATGAAGAAAA TCAGCCATTA TGGCCGTCAT CATCATGAAT TCGATCTGGA CGCGGCGCTG
GCGCGCTGCC CGGCGCTGAT CCTGATCGAC GAACTGGCGC ACAGCAATAT TCGCGGTTCC
CGCCATCCTA AACGCTGGCA GGACGTACAA GAGTTGCTGG ACGCCGGTAT CGATGTGTTT
ACCACCGTCA ACGTGCAGCA TCTGGAAAGC CTGAACGACA TCGTTGGCGG CGTCACCGGC
ATTCGGGTGC GGGAAACCGT CCCCGATCCG ATTTTTGACG ATGCCAATGA AGTGGTGCTG
GTAGACCTGC CGCCTGACGA CCTGCGCCAG CGTCTCAACG AAGGCAAAGT CTACCTGCCG
ATGCAGGCGG AACGCGCCAT CGAAAACTTC TTTCGCAAAG GCAACCTGCT GGCCCTACGC
GAGCTGGCGC TCCGGCGTAT GGCCGATCGG GTGGATGATC AAATGCGGGC GATGCGCGCC
AGTCAAGGGC GTGAGCGAGT CTGGCATACC CGTGATGCCA TTCTGTTGTG CATTGGCCGC
GGCGCAGGCA ACGAAAAACT GGTGCGCACC GCCGCTCGTC TGGCCGCACG ATTGGGCAGC
ATCTGGCACG CAGTTTACGT CGAAACGCCG CGCCTGCATC GCCTGCCGGA AGGCGAACGA
CGCGCCATTT TACGCGCATT GAAACTGGCG CAGGATCTGG GAGCGGAAAC CGCCACCCTT
TCCGATCCAT CGGTAGAACG TGCGGTACTG CGCTACGCCC GCGATCATAA TCTCGGCAAG
ATTGTTATTG GCCGTCACAC CGAACAAAAA CTCGGCTGGT GGCGCCGTAC CCGCTTCGCC
GAGAAACTCG GAAAATTAGG GCCAGACCTC GATCTGGTCG TCGTTTCCGT ACAAGACGAC
GCCACGCCGC CACCGCCTAA AACACCGGAC GCCCGCGCAA TAACCGATAA ATGGCGACTA
CAGTTCTACG GCGGCGGCGT TGCCGTACTA CTCTGCATGT TGATCACGCT ACTGGCGCTG
TGGTCGCCGT TTTCCATGCT GGAACCGGTC AACCTGGTGA TGCTTTATTT GCTGGCCGTA
GTGATCATCG CGCTGTTTTA TGGTCGCTGG CCGTCGGTAT TCGCCGCCGT CATCAACGTC
GCCAGCTTTG ATCTGTTTTT TGTGGCGCCG AAAGGCACAT TCGCCGTTGC CGATGCACAG
TATCTGGTCA CGTTTGCGGT GATGCTGACC ATCGGGATTC TGGTGGGAAA TCTGACTGCG
GGGGTCCGTT ATCAGGCGCG CGTCGCCCGC TACCGCGAGC AGCGCGTAAG GCATCTGTAC
GAAATGTCCA AGGCGCTCAA CCGCAGCCTG TCGGTAGAGG ATATTGCCAA AGCCAGCCAT
CATTTTCTCC GTTCAACCTT TCAGGCCAAG ATAGCCATTT TGCTGGCCGA ACCGGTCTCC
TCCCCGATGG CGGAGCTACA ACAGGTCGCG CTCGATGAGC CCGAGCAACT GATCGTCGAC
CGGGCTATCG CCCGCTGGAG TTACGATCAC GCCGCCCCCG CCGGGGCCGG TACGTCCACG
CTGCCGGGCG TTCCTTATCA ATTGTTGCCG CTGGCGACAC CGCAAACGAC GTTCGGTATT
ATCGCCGTCG AGCCGAGTAA CGTGCGCCAG TTGATGATTC CGGAACAGCA ACGCATGTTG
GAAACCTTCA CCGTCCTTAT CACCAACGCG CTGGAACGCC TGCAACTGGT CCATAACGCC
GAAAATTCGC GTCTGGACGC CGAACGCGAG CAACTGCGCA ACTCGCTGCT GGCGGCGTTA
TCCCATGATT TACGTACTCC GCTGACCGTG TTGTTCGGTC AGGCGGAAAT TCTGACGCTC
AACCTGGCTT CCGAAGGCTC GCCTTATGCG CCGCAGGCCA GCCAGATTCG CCAGCACATC
CTCAGTACGA CGCGGCTGGT CAATAACTTA CTGGATATGG CGCGTATCCA GTCCGACGGC
TTTAGTCTGC GCAAAGAGTG GCAAACGCTG GAAGAGTTAA TCGGCAGCGC ATTGCGACAG
TTGGAAAACT CACTGGCAAG CAATACTATT CAATTACGGC TGCCGCAGGA CATGCTGCTG
GTGTATTGCG ACGCCAGCCT GATCGAACGG GTGTTGATCA ACCTGCTGGA AAACGCCATC
AAATACGCCG GCGAGCAGGC GACCATTCTT GTTTCCGCCA GCCGGGTATC CTCATCGGTT
GCCAGCGACC TGCTGGAAGT GCAGATTCAG GATAACGGCC CCGGCATCCC CGCTGGTCAG
GAAAAAATGA TTTTTGACAA GTTTGCCCGC GGGCACAAAG AGTCTTCAAT TCCCGGCGTT
GGGCTGGGAT TGGCCATCTG CCGGGCGATT GTAGAGATTC ACGGCGGGCG AATCTGGGCC
ACCAACGCGG ATGAAGGCGG TGCGGTGTTC CACTTTACTT TGCCGCTGGT GGCGCCGCCG
GCGCTCGAAC CTGAAGAGAT GGAGTCCTGA
 
Protein sequence
MTDEEQHRPD PDSLLSQIEE QPRGKLKIFF GACAGVGKTY AMLQEAQRLK AQGLDVLVGV 
VETHGRSETA ALLAGLPHLP MKKISHYGRH HHEFDLDAAL ARCPALILID ELAHSNIRGS
RHPKRWQDVQ ELLDAGIDVF TTVNVQHLES LNDIVGGVTG IRVRETVPDP IFDDANEVVL
VDLPPDDLRQ RLNEGKVYLP MQAERAIENF FRKGNLLALR ELALRRMADR VDDQMRAMRA
SQGRERVWHT RDAILLCIGR GAGNEKLVRT AARLAARLGS IWHAVYVETP RLHRLPEGER
RAILRALKLA QDLGAETATL SDPSVERAVL RYARDHNLGK IVIGRHTEQK LGWWRRTRFA
EKLGKLGPDL DLVVVSVQDD ATPPPPKTPD ARAITDKWRL QFYGGGVAVL LCMLITLLAL
WSPFSMLEPV NLVMLYLLAV VIIALFYGRW PSVFAAVINV ASFDLFFVAP KGTFAVADAQ
YLVTFAVMLT IGILVGNLTA GVRYQARVAR YREQRVRHLY EMSKALNRSL SVEDIAKASH
HFLRSTFQAK IAILLAEPVS SPMAELQQVA LDEPEQLIVD RAIARWSYDH AAPAGAGTST
LPGVPYQLLP LATPQTTFGI IAVEPSNVRQ LMIPEQQRML ETFTVLITNA LERLQLVHNA
ENSRLDAERE QLRNSLLAAL SHDLRTPLTV LFGQAEILTL NLASEGSPYA PQASQIRQHI
LSTTRLVNNL LDMARIQSDG FSLRKEWQTL EELIGSALRQ LENSLASNTI QLRLPQDMLL
VYCDASLIER VLINLLENAI KYAGEQATIL VSASRVSSSV ASDLLEVQIQ DNGPGIPAGQ
EKMIFDKFAR GHKESSIPGV GLGLAICRAI VEIHGGRIWA TNADEGGAVF HFTLPLVAPP
ALEPEEMES