Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2930 |
Symbol | |
ID | 8118341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3336488 |
End bp | 3339217 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644853301 |
Product | sensor protein KdpD |
Protein accession | YP_003005231 |
Protein GI | 251790510 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.770189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG AGGAGCAACA TCGCCCCGAT CCGGACAGCC TGCTGAGCCA GATTGAGGAG CAACCACGCG GCAAGCTGAA GATCTTCTTC GGCGCCTGCG CCGGCGTCGG TAAAACCTAC GCGATGTTGC AGGAAGCGCA ACGCCTGAAA GCGCAAGGGC TGGATGTGCT GGTCGGGGTG GTGGAAACTC ATGGGCGCAG CGAAACCGCA GCGCTGCTGG CAGGCTTGCC GCACCTGCCG ATGAAGAAAA TCAGCCATTA TGGCCGTCAT CATCATGAAT TCGATCTGGA CGCGGCGCTG GCGCGCTGCC CGGCGCTGAT CCTGATCGAC GAACTGGCGC ACAGCAATAT TCGCGGTTCC CGCCATCCTA AACGCTGGCA GGACGTACAA GAGTTGCTGG ACGCCGGTAT CGATGTGTTT ACCACCGTCA ACGTGCAGCA TCTGGAAAGC CTGAACGACA TCGTTGGCGG CGTCACCGGC ATTCGGGTGC GGGAAACCGT CCCCGATCCG ATTTTTGACG ATGCCAATGA AGTGGTGCTG GTAGACCTGC CGCCTGACGA CCTGCGCCAG CGTCTCAACG AAGGCAAAGT CTACCTGCCG ATGCAGGCGG AACGCGCCAT CGAAAACTTC TTTCGCAAAG GCAACCTGCT GGCCCTACGC GAGCTGGCGC TCCGGCGTAT GGCCGATCGG GTGGATGATC AAATGCGGGC GATGCGCGCC AGTCAAGGGC GTGAGCGAGT CTGGCATACC CGTGATGCCA TTCTGTTGTG CATTGGCCGC GGCGCAGGCA ACGAAAAACT GGTGCGCACC GCCGCTCGTC TGGCCGCACG ATTGGGCAGC ATCTGGCACG CAGTTTACGT CGAAACGCCG CGCCTGCATC GCCTGCCGGA AGGCGAACGA CGCGCCATTT TACGCGCATT GAAACTGGCG CAGGATCTGG GAGCGGAAAC CGCCACCCTT TCCGATCCAT CGGTAGAACG TGCGGTACTG CGCTACGCCC GCGATCATAA TCTCGGCAAG ATTGTTATTG GCCGTCACAC CGAACAAAAA CTCGGCTGGT GGCGCCGTAC CCGCTTCGCC GAGAAACTCG GAAAATTAGG GCCAGACCTC GATCTGGTCG TCGTTTCCGT ACAAGACGAC GCCACGCCGC CACCGCCTAA AACACCGGAC GCCCGCGCAA TAACCGATAA ATGGCGACTA CAGTTCTACG GCGGCGGCGT TGCCGTACTA CTCTGCATGT TGATCACGCT ACTGGCGCTG TGGTCGCCGT TTTCCATGCT GGAACCGGTC AACCTGGTGA TGCTTTATTT GCTGGCCGTA GTGATCATCG CGCTGTTTTA TGGTCGCTGG CCGTCGGTAT TCGCCGCCGT CATCAACGTC GCCAGCTTTG ATCTGTTTTT TGTGGCGCCG AAAGGCACAT TCGCCGTTGC CGATGCACAG TATCTGGTCA CGTTTGCGGT GATGCTGACC ATCGGGATTC TGGTGGGAAA TCTGACTGCG GGGGTCCGTT ATCAGGCGCG CGTCGCCCGC TACCGCGAGC AGCGCGTAAG GCATCTGTAC GAAATGTCCA AGGCGCTCAA CCGCAGCCTG TCGGTAGAGG ATATTGCCAA AGCCAGCCAT CATTTTCTCC GTTCAACCTT TCAGGCCAAG ATAGCCATTT TGCTGGCCGA ACCGGTCTCC TCCCCGATGG CGGAGCTACA ACAGGTCGCG CTCGATGAGC CCGAGCAACT GATCGTCGAC CGGGCTATCG CCCGCTGGAG TTACGATCAC GCCGCCCCCG CCGGGGCCGG TACGTCCACG CTGCCGGGCG TTCCTTATCA ATTGTTGCCG CTGGCGACAC CGCAAACGAC GTTCGGTATT ATCGCCGTCG AGCCGAGTAA CGTGCGCCAG TTGATGATTC CGGAACAGCA ACGCATGTTG GAAACCTTCA CCGTCCTTAT CACCAACGCG CTGGAACGCC TGCAACTGGT CCATAACGCC GAAAATTCGC GTCTGGACGC CGAACGCGAG CAACTGCGCA ACTCGCTGCT GGCGGCGTTA TCCCATGATT TACGTACTCC GCTGACCGTG TTGTTCGGTC AGGCGGAAAT TCTGACGCTC AACCTGGCTT CCGAAGGCTC GCCTTATGCG CCGCAGGCCA GCCAGATTCG CCAGCACATC CTCAGTACGA CGCGGCTGGT CAATAACTTA CTGGATATGG CGCGTATCCA GTCCGACGGC TTTAGTCTGC GCAAAGAGTG GCAAACGCTG GAAGAGTTAA TCGGCAGCGC ATTGCGACAG TTGGAAAACT CACTGGCAAG CAATACTATT CAATTACGGC TGCCGCAGGA CATGCTGCTG GTGTATTGCG ACGCCAGCCT GATCGAACGG GTGTTGATCA ACCTGCTGGA AAACGCCATC AAATACGCCG GCGAGCAGGC GACCATTCTT GTTTCCGCCA GCCGGGTATC CTCATCGGTT GCCAGCGACC TGCTGGAAGT GCAGATTCAG GATAACGGCC CCGGCATCCC CGCTGGTCAG GAAAAAATGA TTTTTGACAA GTTTGCCCGC GGGCACAAAG AGTCTTCAAT TCCCGGCGTT GGGCTGGGAT TGGCCATCTG CCGGGCGATT GTAGAGATTC ACGGCGGGCG AATCTGGGCC ACCAACGCGG ATGAAGGCGG TGCGGTGTTC CACTTTACTT TGCCGCTGGT GGCGCCGCCG GCGCTCGAAC CTGAAGAGAT GGAGTCCTGA
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Protein sequence | MTDEEQHRPD PDSLLSQIEE QPRGKLKIFF GACAGVGKTY AMLQEAQRLK AQGLDVLVGV VETHGRSETA ALLAGLPHLP MKKISHYGRH HHEFDLDAAL ARCPALILID ELAHSNIRGS RHPKRWQDVQ ELLDAGIDVF TTVNVQHLES LNDIVGGVTG IRVRETVPDP IFDDANEVVL VDLPPDDLRQ RLNEGKVYLP MQAERAIENF FRKGNLLALR ELALRRMADR VDDQMRAMRA SQGRERVWHT RDAILLCIGR GAGNEKLVRT AARLAARLGS IWHAVYVETP RLHRLPEGER RAILRALKLA QDLGAETATL SDPSVERAVL RYARDHNLGK IVIGRHTEQK LGWWRRTRFA EKLGKLGPDL DLVVVSVQDD ATPPPPKTPD ARAITDKWRL QFYGGGVAVL LCMLITLLAL WSPFSMLEPV NLVMLYLLAV VIIALFYGRW PSVFAAVINV ASFDLFFVAP KGTFAVADAQ YLVTFAVMLT IGILVGNLTA GVRYQARVAR YREQRVRHLY EMSKALNRSL SVEDIAKASH HFLRSTFQAK IAILLAEPVS SPMAELQQVA LDEPEQLIVD RAIARWSYDH AAPAGAGTST LPGVPYQLLP LATPQTTFGI IAVEPSNVRQ LMIPEQQRML ETFTVLITNA LERLQLVHNA ENSRLDAERE QLRNSLLAAL SHDLRTPLTV LFGQAEILTL NLASEGSPYA PQASQIRQHI LSTTRLVNNL LDMARIQSDG FSLRKEWQTL EELIGSALRQ LENSLASNTI QLRLPQDMLL VYCDASLIER VLINLLENAI KYAGEQATIL VSASRVSSSV ASDLLEVQIQ DNGPGIPAGQ EKMIFDKFAR GHKESSIPGV GLGLAICRAI VEIHGGRIWA TNADEGGAVF HFTLPLVAPP ALEPEEMES
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