| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2916 |
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| Symbol | sdhA |
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| ID | 8118327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3321044 |
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| End bp | 3322810 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644853287 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003005217 |
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| Protein GI | 251790496 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC CAGTCAGAGA GTTTGATGCC GTTGTTGTCG GTGCAGGCGG TGCAGGTATG
CGCGCTGCGC TGCAGATTTC CCAAATGGGG TTGTCTTGCG CCTTATTATC AAAAGTGTTC
CCGACTCGTT CCCATACTGT ATCCGCTCAA GGCGGCATTA CGGTAGCGCT AGGCAATAGC
CACGAGGATA ACTGGGAATG GCACATGTAT GACACCGTGA AAGGCTCCGA CTATATCGGT
GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGCCCGG AAGCGATTCT GGAGCTGGAA
CATATGGGAT TGCCGTTCTC CCGTCTGGAT GATGGCCGCA TTTATCAGCG TCCGTTCGGC
GGTCAGTCCA GGAATTTCGG CGGCGAGCAG GCTGCCCGTA CCGCGGCGGC GGCGGACCGT
ACCGGCCATG CGCTGTTGCA TACGCTGTAT CAGCAGAACC TGAAAAACCA CACCACCATT
TTTTCCGAAT GGTATGCGTT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTCGGTTGT
ACGGCTATCT GTATTGAAAC CGGCGAAGTC GTTTATTTCA AAGCTCGTGC CACGGTGCTG
GCAACCGGCG GCGCCGGCCG TATTTATCAA TCCACTACCA ATGCTCACAT CAACACCGGC
GACGGCGTCG GTATGGCGCT GCGTGCCGGT GTACCGGTGC AGGACATGGA AATGTGGCAG
TTCCACCCAA CCGGCATCGC CGGCGCCGGT GTGCTGGTGA CCGAAGGTTG CCGCGGCGAG
GGTGGTTACC TGTTGAACAA ACACGGCGAG CGTTTTATGG AACGTTATGC GCCTAACGCT
AAAGATCTGG CAGGGCGTGA CGTGGTGGCT CGCTCCATCA TGATTGAAAT CCGTGAGGGG
CGTGGCTGTG ACGGTCCTTG GGGGCCACAT GCCAAGCTGA AACTGGATCA CCTGGGCAAA
GAGGTGCTTG AGTCTCGTCT GCCTGGGATT CTGGAGCTGT CTCGTACATT TGCCCACGTC
GACCCGGTGA AAGAACCGAT TCCGGTTATT CCGACTTGCC ATTATATGAT GGGCGGTATC
CCAACCAAAG TAACGGGACA AGCGCTGACG GTGAACGAGA AAGGCGAAGA TGTGGTGATC
CCGGGTCTGT TCGCTGTGGG TGAAATCGCC TGCGTATCGG TACACGGTGC TAACCGTTTA
GGCGGCAACT CGTTACTGGA CTTGGTGGTA TTCGGTCGTT CCGCCGGTAT GCACCTGCAG
GAGTCTCTTG CTGAACAAGG CGTTAGCCGT GATGCCAGTG ATTCCGATAT CGAAGCCTCG
CTGGACAGAC TTAACCGTTG GAACAACACG CGTTCCGGCG AAGATCCGGT AGAAATCCGT
AAAGCGTTGC AGTCTTGTAT GCAGAACAAC TTCTCGGTGT TCCGCGAAGG CGATGCGATG
GCGAAGGGGC TGGACGAGTT GAAAGTGATT CGTGAACGTC TCAAAAACGC CCGTCTGGAC
GACACATCAA GCGAGTTCAA CACCCAGCGT ATCGAATGTT TGGAGCTGGA TAACCTGATG
GAAACGGCTT ATGCCACCGC GGTGTCTGCA AACTTCCGTA CTGAAAGCCG TGGTGCCCAC
AGCCGATTCG ACTATCCTGA TCGTGATGAC GAAAATTGGT TGTGCCATTC GCTGTATCAA
CCGCAAACCG AAAGCATGAC GCGCCGCGAG GTCAACATGC AGCCTAAACT GCGTCCGGCG
TTCCCGCCGA AAGTGCGTAC CTATTAA
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| Protein sequence | MNLPVREFDA VVVGAGGAGM RAALQISQMG LSCALLSKVF PTRSHTVSAQ GGITVALGNS
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG
GQSRNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TAICIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEKGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRSAGMHLQ
ESLAEQGVSR DASDSDIEAS LDRLNRWNNT RSGEDPVEIR KALQSCMQNN FSVFREGDAM
AKGLDELKVI RERLKNARLD DTSSEFNTQR IECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDYPDRDD ENWLCHSLYQ PQTESMTRRE VNMQPKLRPA FPPKVRTY
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