| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2902 |
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| Symbol | tolB |
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| ID | 8118313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3305643 |
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| End bp | 3306929 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644853273 |
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| Product | translocation protein TolB |
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| Protein accession | YP_003005203 |
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| Protein GI | 251790482 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000513444 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGG CATTAAAAAT TGCATTGAGT TTTCTGATGC TGTGGACGGC TGTGTTACAT
GCAGAAGTCC GTATTGAAAT TACTCAGGGG GTCGACTCCG CGCGGCCTAT CGCCGTGGTG
CCGTTTAAAT CGGCGGGCGG TGCTGTTCCT GAAGAAATCG GCAATATTGT TGCTGCAGAT
TTACGTAACA GCGGCAAGTT TAACCCTATC GACCCGAGCC GTATGCCGCA ACAACCGGGC
ACCGCGGCGG AAGTCACGCC ATCCGCCTGG ACTGCTCTTG GGATTGATGC TGTGATTGTA
GGTCAGGTGC AGCCGACTGC GGATGGTTAT CTGGTTTCTT ATCAGTTGGT AGATACCTCC
GGTAATGCAG GCAGCGTGTT GGCACAGAAC CAATTCAAGG TGACCAAACA GTGGCTGCGT
TATGCCGCTC ACACCGCCAG CGACGAAGTG TTTGAAAAGC TGAGCGGTAT TAAGGGGGCT
TTCCGTACTC GTATCGCATA TGTGGTGCAA ACCAATGGCG GGCAGTACCC GTATGAATTA
CGTGTTGCGG ATTATGACGG TTATAACCAA TTCGTGGTGC ACCGCTCTCC TGAACCGCTG
ATGTCTCCGT CCTGGTCGTC GGATGGCAGC AAACTGGCGT ATGTTACGTT TGAAAGTGGC
CGCTCAGCAT TGGTTGTGCA GACACTGGCA AACGGCGATA TCAGGCAGAT TGCCTCTTTC
CCGCGTCATA ATGGCGCGCC GGCATTCTCT CCGGATGGGT CTAAACTGGC ATTTGCTCTG
TCCAAGAGCG GTAGCCTGAA TCTGTATGTG ATGAATCTGG GCTCTGGTCA GATTTCCCAG
GTGACGGACG GTCGCAGCAA CAATACCGAA CCGACCTGGC TCCCTGATAG CCAAACGTTG
GCCTATACTT CTGACCAGGC TGGTCGCCCT CAGATTTATA AAGTGGGTAT TAACGGCGGA
GCTCCCCAAC GTCTGACTTG GGAAGGGTCC CAGAATCAGG ATGCTGAAAT CAGCAGCGAT
GGTAAATTCC TGGTGATGGT CAGCTCCAAC GGTGGCGCTC AGCATATCGC CAAACAGGAT
CTGGTAACGG GTGGCGTTCA AGTGTTAACG GACACGTTCC TGGATGAAAC GCCGAGTATC
GCACCCAATG GCACCATGGT AATCTACAGT TCCAAGCAGG GGCTGGGTTC CGTGCTGCAA
CTGGTTTCGA CCGACGGGCG TTTTAAAGCG CGTCTTCCGG CGACTGATGG TCAGGTGAGA
TTCCCTGCCT GGTCGCCGTA TATGTAA
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| Protein sequence | MKQALKIALS FLMLWTAVLH AEVRIEITQG VDSARPIAVV PFKSAGGAVP EEIGNIVAAD
LRNSGKFNPI DPSRMPQQPG TAAEVTPSAW TALGIDAVIV GQVQPTADGY LVSYQLVDTS
GNAGSVLAQN QFKVTKQWLR YAAHTASDEV FEKLSGIKGA FRTRIAYVVQ TNGGQYPYEL
RVADYDGYNQ FVVHRSPEPL MSPSWSSDGS KLAYVTFESG RSALVVQTLA NGDIRQIASF
PRHNGAPAFS PDGSKLAFAL SKSGSLNLYV MNLGSGQISQ VTDGRSNNTE PTWLPDSQTL
AYTSDQAGRP QIYKVGINGG APQRLTWEGS QNQDAEISSD GKFLVMVSSN GGAQHIAKQD
LVTGGVQVLT DTFLDETPSI APNGTMVIYS SKQGLGSVLQ LVSTDGRFKA RLPATDGQVR
FPAWSPYM
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