| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2863 |
|---|
| Symbol | |
|---|
| ID | 8120559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3257590 |
|---|
| End bp | 3258792 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644853232 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003005164 |
|---|
| Protein GI | 251790443 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.401777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTC TGATTATCAA CACGCTGTAT CACCCGTACA AGGTGGGGGG CGCCGAAGTG
TCCGTGCAGT TAATGGCGGA AGCACTGGTA CGGCGACACC ATCAGGTACA GGTACTGTGC
CTGACGCCGG AAAGGCAGCG CAGCGACGAC GTCATCAATG GCGTTGCCGT GTGTTATGTG
CCGCTGGCGA ACGATTACTG GCCGTTTGAT GGTGAAAAAA AGTCTTTTTA CCAGAAGGCG
CGGTGGCATC TGAAAGATTA TTACAACGTC GAGATGCGCA CCGTGGTGAT GGAGGTTGTC
CGGGAGTTTG CACCTGACCT GGTGCATACC AACAATATCG CCGGGTTTTC CGTATCGGCC
TGGTCGGCGG CGAAAGCCTG CGGCGTGAAG ATTCTACACA CCAGCCGGGA TTATTATCTG
TTCCACCATA ATGCGACGTT ATTTAGCCGC GGCCGAAATC AGGAGCCGAA CGCACTGAGT
ATTCGTCTGC TGTCTGCTCT GAAACGACGG TACAGCCGTC TGGTGGACGG TTATGTAGGG
ATTAGCCGGT TTATTTTAGA ACGCCATCGT CAGGCTGGCT TTTTTCCCGG CGTACACCAG
TCATTTATTT ATGACATTGT GCTGCCTGCA GTGCAGGACG CCGAACCGGC AGCCGCGGCC
ACGAGCAACG GAAAACGCTG GCGTATCGGT TTTATCGGCA AGCTGGCGGA AGATAAGGGA
TTTGACGAAT TTTGCCTGCT GGCACGGCAT TATCGCCATC ATCCGGATTA TGCCTTTTAC
GCGGCAGGGC GCATCACCCA GGGTAATCCG TTGGTGGAAG AGGCGACAAG CAGCGGCGTG
ACGCTGTTGG GTTTTGCCAG CTTGGAAGCG TTCATGGGGC AGGTGGATAT TGTGGTATTG
CCGGTGAAAT GGCATGAACC GTTCGGCCGG GTGCTGGTGG AAAGTATCTT TTATGGCAAA
CGTGTACTGA CTAACCGGAT GGGGGCGGTC AGTGAATTAT CGACCTTATT GCCGAATATT
TATTTCATGG AAACCTGTTC GCTGGAAGAG GTTATCAGAA AACCGTTACA ACCACTCAGC
CCGGAAATAG TGAATTCTTT TACGCCGGAT ATCATTGCCG GAGAATTTGA AAAGGTTTAT
GTGAAAATGC TGATGCCTGA ATGCTATGGG CATAATTTAT CGCCTGCAAA AGGGGAAAAA
TAA
|
|---|
| Protein sequence | MRILIINTLY HPYKVGGAEV SVQLMAEALV RRHHQVQVLC LTPERQRSDD VINGVAVCYV
PLANDYWPFD GEKKSFYQKA RWHLKDYYNV EMRTVVMEVV REFAPDLVHT NNIAGFSVSA
WSAAKACGVK ILHTSRDYYL FHHNATLFSR GRNQEPNALS IRLLSALKRR YSRLVDGYVG
ISRFILERHR QAGFFPGVHQ SFIYDIVLPA VQDAEPAAAA TSNGKRWRIG FIGKLAEDKG
FDEFCLLARH YRHHPDYAFY AAGRITQGNP LVEEATSSGV TLLGFASLEA FMGQVDIVVL
PVKWHEPFGR VLVESIFYGK RVLTNRMGAV SELSTLLPNI YFMETCSLEE VIRKPLQPLS
PEIVNSFTPD IIAGEFEKVY VKMLMPECYG HNLSPAKGEK
|
|---|
| |