| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2806 |
|---|
| Symbol | |
|---|
| ID | 8119809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3188917 |
|---|
| End bp | 3190395 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644853177 |
|---|
| Product | type VI secretion protein, EvpB/VC_A0108 family |
|---|
| Protein accession | YP_003005109 |
|---|
| Protein GI | 251790388 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGG TTGAAGAACA GGCCCAGACA AGCGCGGCCG GTGGTTCATC ATCGCTGCTT
GAAGAAATCA TGGCGCAGGC GCGCATCACC CCGGTGGATG AAGGTTACAA CGTCGCCAAA
CAGGGGATCG CCGCGCTGGT GGCGAACATT CTGGACAGCG GCAACGCGGC CGAGCCGGTG
AACAAGGCGC TGGTCGACAG CATGATCGTT GAGCTGGACA AAAAACTCAG CAAACAGATC
GACGTGATTC TTCATGCACA GGAGTTGCAG GAGCTGGAAT CTTCCTGGCG CTCACTGAAA
CTGCTGATCG ATCGCACCGA TTTCCGTGAA AACATCAAAA TCCTGCTGCT GCACGCGACC
AAAAACGAGC TGCTGGAAGA CTTTGAGTTT GCACCGGAAA TTACCCAGTC CGGTTTCTAT
AAACACGTTT ATTCCAGCGG CTACGGCCAG TTCGGCGGCC AGCCGATCGG CGGGGTGATC
GGCGATTACG CGCTGACTCA AAGCTCGCCG GACATCAAGC TGATGCAGTA TGTCAGCGCG
GTGGGCGCGA TGGCGCACGC ACCGTTCATC TCCTCCGTCG CACCGACCTT CTTCGGTGTG
GACAGCTTTA CCGATCTGCC GTCGATCAAA GACCTGAAAT CGGTATTCGA AGGCCCGGCT
TACACCAAAT GGCGTTCGAT GCGCGAATCG GAAGATGCCC GCTATCTGGG GCTGACGGCG
CCGCGTTTCC TGGCTCGCCT GCCGTATGAC CCGGTAGAAA ACCCCATCAA AGGGTTTCAC
TACAAGGAAG ACATCAGCGC CAACCACGAA CACTACCTGT GGGGCAACAC CGCGTATCTG
ATGGGGACCG CCATCACCGA CAGCTTCGCC AAGTACCGCT GGTGCCCGAA CATTATCGGC
CCGCAAAGCG GCGGCGCCAT CACCGATCTG CCGGTGCATG TGTATGAAGC GATGGGCCAG
TTGCAGGCCA AGATTCCGAC CGAGGTGTTG ATCACCGACC GTCGCGAATA CGAAATGGCC
GAAGAGGGTT TCATCACCCT GACCATGCGT AAAGACAGCG ATAACGCCGC GTTCTTCTCC
GCCAACTCGG TGCAGAAACC CAAGGTGTTC GCCAATACCA AAGAAGGGAA AGAGGCGGAA
ACCAACTACA AACTGGGTAC GCAACTGCCG TACATGTTCA TCATCAACCG CCTGGCGCAC
TACATCAAAG TGTTGCAGCG CGAGCAAATC GGTTCCTGGA AAGAGCGTCA GGATCTGGAG
CGCGAGCTGA ATAACTGGAT CAAGCAGTAC GTCGCCGATC AGGAAAACCC GCCGGCTGAT
GTACGCAGCC GCCGTCCGCT GCGTGCGGCA CAGATCAAAG TGCTGGATGT GGAAGGCGAA
CCGGGCTGGT ATCAGGTGAC CATGGCGGTG CGCCCGCACT TCAAGTACAT GGGGGCGAAC
TTTGAATTGT CCCTGGTTGG TCGTCTGGAT AAGGAATAA
|
|---|
| Protein sequence | MSMVEEQAQT SAAGGSSSLL EEIMAQARIT PVDEGYNVAK QGIAALVANI LDSGNAAEPV
NKALVDSMIV ELDKKLSKQI DVILHAQELQ ELESSWRSLK LLIDRTDFRE NIKILLLHAT
KNELLEDFEF APEITQSGFY KHVYSSGYGQ FGGQPIGGVI GDYALTQSSP DIKLMQYVSA
VGAMAHAPFI SSVAPTFFGV DSFTDLPSIK DLKSVFEGPA YTKWRSMRES EDARYLGLTA
PRFLARLPYD PVENPIKGFH YKEDISANHE HYLWGNTAYL MGTAITDSFA KYRWCPNIIG
PQSGGAITDL PVHVYEAMGQ LQAKIPTEVL ITDRREYEMA EEGFITLTMR KDSDNAAFFS
ANSVQKPKVF ANTKEGKEAE TNYKLGTQLP YMFIINRLAH YIKVLQREQI GSWKERQDLE
RELNNWIKQY VADQENPPAD VRSRRPLRAA QIKVLDVEGE PGWYQVTMAV RPHFKYMGAN
FELSLVGRLD KE
|
|---|
| |