Gene Dd1591_2805 details

Gene Information

• Locus tag: Dd1591_2805
• ID: 8119808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 3188479
• End bp: 3188910
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644853176
• Product: type VI secretion system lysozyme-related protein
• Protein accession: YP_003005108
• Protein GI: 251790387
• COG category: [S] Function unknown
• COG ID: [COG3518] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03357] type VI secretion system lysozyme-related protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCGC TCTCTGCCTG GGAGCGGGGA TCTGCGGCCA GCCTGTTTGA TCGTATCCGG 
GGAGAGGAGC GCCGTTCCTC TCCCGAAACG GAGTTGGAAG ACCTGATCGC GTCGGTGAAA 
CGCCAGCTTG ATCAGGTACT GAATACGCGC CCCGGCAGTT GTCGCAGCGC ACCCGAGCTT 
GGCGTGATTG ATTTTAATGA CGCCACGCAG GGCGGCGCGG ATATCCGGGG CAAAATCCGT 
GAAGCGATCC GACAGTGTAT CTGTCGCTTT GAACCGCGCA TTGTCCATGT GGACGTCAGT 
GCATCGGACT ATCTGTCCAA CCCGCTGGAG ATGTCGTTTC AGGTCACCGC ACATGTGCGG 
CTGGAAGAAC TGGAGCAGGT CACCTCCTTC AATATTCATA TGGACAGCCA CCGCCATTAC 
AGAATGATGT GA 

 

Protein sequence

MPSLSAWERG SAASLFDRIR GEERRSSPET ELEDLIASVK RQLDQVLNTR PGSCRSAPEL 
GVIDFNDATQ GGADIRGKIR EAIRQCICRF EPRIVHVDVS ASDYLSNPLE MSFQVTAHVR 
LEELEQVTSF NIHMDSHRHY RMM