| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2797 |
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| Symbol | |
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| ID | 8119800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3177657 |
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| End bp | 3179195 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644853168 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_003005100 |
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| Protein GI | 251790379 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTG CCCTCGCCTT GGCGCTCTCG CTGACCCGGC ACCGGGATGA AGCCGGCCTG
TGTGAATGGC TGCTCGGCAC GCTGCGTGCT GAATGGCAGC CGCAGGGGGC GCTGCTGGGT
ATGGTGGATG TCAGCGGGCG TCAGTTGATG TGCAGCGGTT GGGTACACCG CACGCCGCTG
TCGCTGTCGC TCAGCGTGGA TGATTTCAGT CATCCGCTGG CCTATGTGTT GCTTAAAAAT
CAGGTTCGCA GTTGGACGTC GCTGTACGGC GGCGCCCGTA TCGAACATGA GGGCTTTCGT
CAGTTGCTGG CCGATGCCGG CACGGCTTGC GGCTTGTTCG CTATGCCGTT GCAGGCGGAC
GGCGGCCGAC CGCTGGCGGT ATTGGCGCTG TTGGATACGC CGGAACGATT ACAGGCGCTC
GGGCGGCATG GCGACTGCGC GCAACTGGCG CAGATATTTT GCAGCCAGTT GGCGCTGATT
CGCGAGCTGG GCCGCAGCCA ACGCGAGCAG ACCGCGCTGC GCGATTCGTT GCGCCAGATT
AAAGACGAAG GCGCGCTGCG GCATGAACGG GAAAAGCGGG TGGCGGAAGG GTTGATCGGG
CAGTCCGTCG CGGCGCGGCA GTTACAGCAG CAGATTTGCC AGGCGGCCGG CCATCGTCTG
GCGGTGCTGA TCCACGGCGA AACCGGCGTG GGCAAAGAGG TGGTGGCCCG GCTGTTGCAC
CAGTGTTCCG AACGCGCCGA CCGGCCGTTC ATCGCCATTA ACTGCGCCGC CATTCCGGAA
AATTTGATTG AAAGCGAGCT GTTCGGCTAC GAGAAAGGCG CGTTTTCCGG TGCGCAGAGC
AATAAAGTCG GGCTGGTGGC GCAAGCTAAC GGCGGCACGC TGTTTTTAGA CGAGGTGGGC
GACATGCCGC CGTTGATGCA GGCGAAACTG CTGCGGGTGT TGGAAACCCA CAGCTTCCGC
CCGTTGGGTG CCGGTCAGGA GAGTCATTCC GATTTCCGGT TGATCGCCGC CACGCATCAC
CCGCTGGAAC AGCGGGTGGC GGAAGGCCAG TTCCGTCAGG ATCTCTATCA CCGTCTGTGC
CAGTGTCTGG TGCAGGTAGC GCCGCTGCGC GATCGCCCGG ACGACATCAG CCTGTTGTGC
GAGCACTTTA TCGGGCAATT CGCCCAGCAA CAGCAGAAAC CGCTGGGGCC GCTGCACCGC
ACGTTTCTCA GGCAACTGGT GGGGTATGAC TTCCCCGGTA ATGTGCGTGA GCTGAAGAAC
TTGCTGGAGG TGGCGTGCGC GCAAACGCCG GCAGGCGAGC CGATTCGTCT GGAGTCGTTG
CCGCCGGAAT TGCATCAACG GGTCTGTGAG GGCACAGCCG CCGATAGCGA CGCGTTCCAC
CATATTCAGG ATTTGCGCAT TGCTACCCAG CAGTATGAAG CCGCGGTGAT TGCGGCGCGT
TTGCAGCAGT TTCAGGGCAA CCGGTTACTG GTAGCGGAAA GCCTGAATAT TCCTAAACGA
ACCCTGGATC ACAAGTGCCA GAAACTGGAG GTGAACTGA
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| Protein sequence | MQSALALALS LTRHRDEAGL CEWLLGTLRA EWQPQGALLG MVDVSGRQLM CSGWVHRTPL
SLSLSVDDFS HPLAYVLLKN QVRSWTSLYG GARIEHEGFR QLLADAGTAC GLFAMPLQAD
GGRPLAVLAL LDTPERLQAL GRHGDCAQLA QIFCSQLALI RELGRSQREQ TALRDSLRQI
KDEGALRHER EKRVAEGLIG QSVAARQLQQ QICQAAGHRL AVLIHGETGV GKEVVARLLH
QCSERADRPF IAINCAAIPE NLIESELFGY EKGAFSGAQS NKVGLVAQAN GGTLFLDEVG
DMPPLMQAKL LRVLETHSFR PLGAGQESHS DFRLIAATHH PLEQRVAEGQ FRQDLYHRLC
QCLVQVAPLR DRPDDISLLC EHFIGQFAQQ QQKPLGPLHR TFLRQLVGYD FPGNVRELKN
LLEVACAQTP AGEPIRLESL PPELHQRVCE GTAADSDAFH HIQDLRIATQ QYEAAVIAAR
LQQFQGNRLL VAESLNIPKR TLDHKCQKLE VN
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