| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2794 |
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| Symbol | |
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| ID | 8119797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3172120 |
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| End bp | 3175617 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644853165 |
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| Product | type VI secretion protein IcmF |
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| Protein accession | YP_003005097 |
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| Protein GI | 251790376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TAATCATTAC CTTTCTGCGG CAACAGCTGC CGAAACTGAA ACCATCCTGG
CTGCTGTTGG GGGTGGTGGT ATGGGTGGTG GCGTTGGTAC TGGCCTGGTG GCTGGGGCCG
CGTCTGACCC TCGGCGAGAT GCGCCCGCTG CAAAGCGTGT GGGGCCGCGT GGTGTTCACG
CTGGTCTGGC TGTGGCTGGG CTTTGCCTAC AGCGCCTGGC GCGTCTGGCG GCGGGTACAG
CAACTGCGCG CGGAGCGCCG TGAACAGCAG ACTATCGAGC AGGACCCCTT GCAGGTATAC
GTTGATAGCC AGCAAACCTT TCTGGACCGT TGGCTACAGG CGTTTCAGAC CCAACTGGGC
AAAAAAGCGT TGTACGCCAT GCCCTGGTAT CTGGCCATTG GCCTGTCCGG CAGCGGTAAA
AGCAGCCTGA TTCATCGTGC CAACCCGGCC AATAAGCTCA ACCCGAAACT GGATGCGGAG
TTGCGTGAAG TGGCCGGCGG CCAGCAGGTG AACAGTTGGG TCGGCGAGTC GGCGGTGATT
TGGGACCCCA GCGGCCAATT GCTGGCCCAG CCGGAAGTCG GCGCGGAGCC GTCGGCCGGA
CGTCACGCCC GCCTGTGGCA GCATCTGTTG CAGTGGCTGA GCCTCAACCG TCGTCGCCAG
CCGCTGAACG GGCTGGTGCT GACTATCGAC CTGTCCTGGC TGTCGCAGGC CAGCGTGTCG
GAGCGTAAGG CGTATGCACA GGTGATGCGC GCGCGGTTGC AGGAGATTGC GGTCAATATC
AATACCCGCC TGCCGCTGTA CGTGGCGCTG ACCCGTCTGG ATATGCTGCG CGGTTTTGAC
GTGGTGTACC GCTCGTTGAA CCGGGAAGCG CGTCAGGCGG TGCTCGGGGT GACGTTTACC
CCGCAGGCCA GCCACGGCAA AGGCTGGCTG GAAGAGCTGG AGCGCTTTTG GGACGACTGG
ATCGCCAACC TCAATAATAA CCTGCCGGAA ATGCTGCTCA CGCAGTCGGA CAGCGGCGTG
CGCAATACGC TGTTCGCCTT CGTGCGCCAA CTGGCCGGGC TGAAGGATTA CGTAACGGAA
GTGCTGAGTG AAACGCTGGC GACCGGCGAC GATCGTGCAT TTCTGGTGCG CGGCGTGTAT
GTCAGCTCGG TGTATCAGCA GGGCGTACCG TTTGATGCCT TCGCCCAGTC CGCTTCCCGG
CGTTACCAAT TGCCGGAGCC GATCAACGCC GCCATGCGCG GTGAATCCAA TACTTTCTTT
GTACAGAAAC TGTTCCCGGA GGTGATTTTC CCGGAAGCCA GTCTGGCGGG GGAAAACCGG
CTGCACAGCC TGTATCGCCG TCGCCGCATG AGCATCGGCA TTACCTGCAT GGTGCTGTTC
GGGCTGGCGA TGATAGGCAG TTGGCACCAT TTCTACCGGG TGAACGAAGA AGCCGGTCGT
AACGTGCTGA CCAAGGCGCA GGCGTTCATC GGCACCAACG AGCTGGAAGG GCAGGCGGGC
TACGGTTACC AGCAACTGCC GCGTTTGAAT TTGATCCGCG ACGCGACCCT GTCGTTCGGC
AACTACCATG AACGCACGCC GATGATGGCG GATCTTGGCT TGTATCAGGG CGATAAGATC
GGCCCTTACG TGGAAGGTTC CTACCTGCAA ATGCTCAACC AGCGTTTCCT GCCGGCGGTG
ATGCAGGGGC TGCTGGAAGA CCTGAATCAG GCGCCGGCCG GCAGCGAGCA AAAACTCACT
ATTTTGCGGG TGATGCGGAT GCTGGACGAC GCCTCCGGGC GCAACAAGAC GCTGGTGGAG
CAGTTCATGG CGCTGCGCTG GCAGAAGGCG TTCCCCGGTC AGGGCAAGGT GCAGGAACAA
CTGATGCAGC ATCTGGATTA CGCGCTGGAG AGGACCGACT GGCACCAGTC CCGCGAGCAG
AAAGACGCGG TGGCGATGTC GACCTTCGCG CCGTTCGTCG ACCCGATCGC CGCCGCCCAA
CGCGAGCTGA GCAAGCTGCC GATGTACCAG CGCGTCTACC AGAGTCTGGT GATGAAAGCG
ACGCAGGTAC TGCCGCCGGA TCTGGCTCTC CGCGACGAGG TGGGGCCGAC GTTTGACTCG
GTATTCTCGC TGCGTAACGA CAAGGCGGGC ATGGTGCCGC GGTTGTTGAC CTATCCCGGT
TTCAGCGATT TCTACCTCAA GCAGGATAAG ACGCTGCTGG ACCTGACCGC GTTGGATGCC
TGGGTGCTGG GCCAGCGTGA GCGCGCCCAC CTGAGCGAGG CCGACCGCAA GGAAATTCTG
CGTCAGGTGA ACGATCGCTA CATCACCGAC TACATCAACC AGTGGCAGAA AGTGCTGGCG
AATATCGATG TGCAGCCGCT GGAAAGCCCG GAGCAGGCGC TGAACATTCT GACCGACATT
ACCGGTAATG ATCAGCCGTT TCAGCGGGTG TTGACCACGG TGAGCGACAA CACCCGCATC
CGCAAGCTGG CGGATGACGA AAACGACACC GCGCAGGGCA TCAATACCCG TATCGGTCGT
CCGTTCATGA CGATTAATGC CGCGCTGAGC GGGCGGGGCG AACAGGGGCC GCTGGTGCAG
GAGGTCAATC AGAAGCTGAC CGATCTCTAC CACTATCTCG ATCAGATTGT GAACGCGACC
GATCCGGGGC AGGCGGCGTT GAAAGCGGTG CAGGCGCGTC AGGGCAACAA GTTCGCCGAC
CCGGTATTCG CGTTGCAGCA GTATGCCCGC AGCCTGCCGG CGCCGCTGGA CCGCTGGGTC
GGCCAACTGG CGGGAGAAAG CGCCAGTCTG GTGACCGGGC TGGCCATGTC GTCGCTCAAT
CAGGAGTGGA TGGACAAAGT GGTGACGCCG TTCAACGACA AACTGGCCGA TCGCTACCCG
TTCAACCCGT CTTCCGACAA GGATGTGCCG TTGTCCGAGA TGGAGCGCTT CTTTGCCGTC
GGCGGGACAT TGGACAGCTT CTACCAGACC AACCTCAAGT CGATTATGGA CGGCGGCATG
TTGGAGGGCG AAGGCGCATC GCCGTTGCAG ACCGAACTGG TGAAACAGCT GGATCGCGCC
ACCCGTATCC GCCAGACGTT GTTTAACGCA CAAGGCAGCC TGGAAATCCA CTTTGTGGTG
GAGCCGGTGG AACTGACCGC CAACAAACGC CGCAGCGTGC TGAACCTGGA CGGCCAGTTG
CTGGAGTACA GCCACGGACG CCGCACTAAG ACGCCGCTGG TGTGGCCGAA CAGTATGCGC
GACGGTGCCG AAAGCAAGCT GACGCTGGTG CCGGATGACC GCGAACGCTC GCCGCGCAGC
CTGAGCTTCA CCGGCCCGTG GGCGATGTTC CGCCTGTTGA CCAACGGCCA ACTGACGCAG
GTGAACGACA ATACCTTCGA CGTGCGTTTC TCGCTGGAAC AAGGCGGCAT GACCTATCGC
GTTTACACCG ACGCCAGCCA CAACCCGTTT GCCGGTGGTC TGTTCAGCCA GTTCAAACTG
CCTGATTCTC TCTATTAA
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| Protein sequence | MLKIIITFLR QQLPKLKPSW LLLGVVVWVV ALVLAWWLGP RLTLGEMRPL QSVWGRVVFT
LVWLWLGFAY SAWRVWRRVQ QLRAERREQQ TIEQDPLQVY VDSQQTFLDR WLQAFQTQLG
KKALYAMPWY LAIGLSGSGK SSLIHRANPA NKLNPKLDAE LREVAGGQQV NSWVGESAVI
WDPSGQLLAQ PEVGAEPSAG RHARLWQHLL QWLSLNRRRQ PLNGLVLTID LSWLSQASVS
ERKAYAQVMR ARLQEIAVNI NTRLPLYVAL TRLDMLRGFD VVYRSLNREA RQAVLGVTFT
PQASHGKGWL EELERFWDDW IANLNNNLPE MLLTQSDSGV RNTLFAFVRQ LAGLKDYVTE
VLSETLATGD DRAFLVRGVY VSSVYQQGVP FDAFAQSASR RYQLPEPINA AMRGESNTFF
VQKLFPEVIF PEASLAGENR LHSLYRRRRM SIGITCMVLF GLAMIGSWHH FYRVNEEAGR
NVLTKAQAFI GTNELEGQAG YGYQQLPRLN LIRDATLSFG NYHERTPMMA DLGLYQGDKI
GPYVEGSYLQ MLNQRFLPAV MQGLLEDLNQ APAGSEQKLT ILRVMRMLDD ASGRNKTLVE
QFMALRWQKA FPGQGKVQEQ LMQHLDYALE RTDWHQSREQ KDAVAMSTFA PFVDPIAAAQ
RELSKLPMYQ RVYQSLVMKA TQVLPPDLAL RDEVGPTFDS VFSLRNDKAG MVPRLLTYPG
FSDFYLKQDK TLLDLTALDA WVLGQRERAH LSEADRKEIL RQVNDRYITD YINQWQKVLA
NIDVQPLESP EQALNILTDI TGNDQPFQRV LTTVSDNTRI RKLADDENDT AQGINTRIGR
PFMTINAALS GRGEQGPLVQ EVNQKLTDLY HYLDQIVNAT DPGQAALKAV QARQGNKFAD
PVFALQQYAR SLPAPLDRWV GQLAGESASL VTGLAMSSLN QEWMDKVVTP FNDKLADRYP
FNPSSDKDVP LSEMERFFAV GGTLDSFYQT NLKSIMDGGM LEGEGASPLQ TELVKQLDRA
TRIRQTLFNA QGSLEIHFVV EPVELTANKR RSVLNLDGQL LEYSHGRRTK TPLVWPNSMR
DGAESKLTLV PDDRERSPRS LSFTGPWAMF RLLTNGQLTQ VNDNTFDVRF SLEQGGMTYR
VYTDASHNPF AGGLFSQFKL PDSLY
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