| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2603 |
|---|
| Symbol | |
|---|
| ID | 8118011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2953439 |
|---|
| End bp | 2954266 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644852982 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_003004915 |
|---|
| Protein GI | 251790194 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGGT TAACCCTGCT CGTCGAACCG TTTTCCTTTC CGTTCATGGT TAAAGCCATG
CTGGCGGCGG GCGTGGTCGG CATGGTGTGT GCGGTGCTCT CTTGTTTTAT GGTGCTCAAA
GGCTGGTCGC TGATGGGCGA CGCCGTTTCC CACGCCGTGC TGCCCGGCGT GGTGCTGGCC
TGGCTGGCGG GCATCCCGCT GGCGATCGGC GCGTTCGCCT CCGGTCTGTT TTGCGCGCTG
GCGACCGGCT ATGTGAAGGA GCGTTGCCGC ATCAAAGAAG ACACGGTGAT GGGGATTCTG
TTTTCCGGCA TGTTCGCCGT CGGCTTGGTG CTGTTCTCGC GCGTCAATAC CGAACAGCAT
CTGAGTCATA TCCTGTTCGG CAACGTACTG GGCATCACCC GCTATGAACT GCAACAAACG
TTGGTGATCA GCCTGCTGGT GCTGGCCGTG GTTATCATCA AATGGCGCGA TCTGGTGTTG
TACTGTTTTG ATGCCACGCA AGCGCAAATC TGCGGTCTGC CGGTAAAACT GCTGCACTAT
GGCTTGCTGA CCCTGCTGTC GCTGACCATC GTCGCCGCGT TGCAGGCGGT CGGCGTGATT
CTGGTGATCG CCATGTTGAT TACCCCCGGC ATTACCGGAT TTGTGTTGTG CAAACGCTTC
GGCTCCATGA TGCTGGTGGC GGTAGCCGCT GCGACATTCT CTTCGGTTTT CGGCACCTGG
CTCAGCTATT TCCTCGATGG TGCGACCGGG CCGTGCATCG TGATTATCCA GTCGCTGATT
TTTCTCATCG CGCAGTGCGT GGCGAAAATA CGAAAACCGC AGCGCTGA
|
|---|
| Protein sequence | MEWLTLLVEP FSFPFMVKAM LAAGVVGMVC AVLSCFMVLK GWSLMGDAVS HAVLPGVVLA
WLAGIPLAIG AFASGLFCAL ATGYVKERCR IKEDTVMGIL FSGMFAVGLV LFSRVNTEQH
LSHILFGNVL GITRYELQQT LVISLLVLAV VIIKWRDLVL YCFDATQAQI CGLPVKLLHY
GLLTLLSLTI VAALQAVGVI LVIAMLITPG ITGFVLCKRF GSMMLVAVAA ATFSSVFGTW
LSYFLDGATG PCIVIIQSLI FLIAQCVAKI RKPQR
|
|---|
| |