| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2590 |
|---|
| Symbol | |
|---|
| ID | 8117998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2940055 |
|---|
| End bp | 2940978 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644852969 |
|---|
| Product | nitrogen assimilation transcriptional regulator |
|---|
| Protein accession | YP_003004902 |
|---|
| Protein GI | 251790181 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAC GTCGCCTGAA ATATTTTATC AAAATTGTTG ATGTGGGCAG CTTAACCCAG
GCGGCGGATA TTCTGCATAT CGCCCAGCCC GCACTCAGCC AGCAACTGGC AACGCTGGAA
GGGGAAGTGA ATCAGCAACT GTTGATCCGA ACCAAGCGCG GGGTGACGCC AACCACCGCC
GGCAACATTC TTTATATCCA TGCGCAGGCG ATTTTGCGCC AGTGCGCGCA GGCGCAAAGT
GCTATCGACC GTTCAGGAAT GGAACTGTGC GGCAATGTTT CCGTCGGCCT GGCTCCCGGC
ACGGCGGCGC AGCAGCTTGC CATTCCACTG ATGAAGGAGG TGCAGCGCCA ACATCCCGGT
ATCGTGCTCT ACTTTAACGA AAATTTCGGC ACGACCTTAA GCGAGCTGAT TATGAACGGG
CGGATGGATA TGGCGGTGAT CTACGATAAC CGTGCCATCC ACGGGCTGCG CTTTATTCCT
TTAATGAGGG AACACCTGTG TTTTGTCTGT CCGAACAGTT TGGGTAAGCC GGTAAAAGAG
ATAGCGCTTG CCGAGGTGGC GCATTATGAC CTGTTCGTGC CGCGCATTTA CAACATCATG
CGTAAGTGTG TGGATGACGC TTTTGCTAAG AAAGGGCTGG ATTACCGGGT CGCCTGCGAA
ATCGAGTCGC AGACGACGCT CAATGCGGCG CTGGCGGAGG GGCTGGGTTG TACGATCATG
CCGGAGTCCG CTGCACGCGC GATGCTGAAG GCATCCGATG CGTGGATGGC GAAAATTATC
GAACCGGATG TTCATGCTTC GCTCTCGTTT TGCATCTCCG ACCATCTGCC GCTCTCGGAA
CCGGCAGAGG CCGTGAAGTC TATTTTGTTG TCACTGGTGT CGAACCGAAC GCCGGATAAC
CGCCCGCTGA TGCTGGTGAG TTAA
|
|---|
| Protein sequence | MNLRRLKYFI KIVDVGSLTQ AADILHIAQP ALSQQLATLE GEVNQQLLIR TKRGVTPTTA
GNILYIHAQA ILRQCAQAQS AIDRSGMELC GNVSVGLAPG TAAQQLAIPL MKEVQRQHPG
IVLYFNENFG TTLSELIMNG RMDMAVIYDN RAIHGLRFIP LMREHLCFVC PNSLGKPVKE
IALAEVAHYD LFVPRIYNIM RKCVDDAFAK KGLDYRVACE IESQTTLNAA LAEGLGCTIM
PESAARAMLK ASDAWMAKII EPDVHASLSF CISDHLPLSE PAEAVKSILL SLVSNRTPDN
RPLMLVS
|
|---|
| |