| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2558 |
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| Symbol | |
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| ID | 8120413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2918466 |
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| End bp | 2918984 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644852944 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003004877 |
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| Protein GI | 251790156 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CATGCTATAT CAGCATCGAA GGGAAAACTC AGGGCAACAT CACCGCCGGT
GCCTTCACCT CCGACTCCGT CGGCAACATC TACGTGCAGG GCCACGAAGA TGAGATGCTG
GTTCAGGAAT TCAAACACAT CGTCACCGTC CCGACCGACC CGCAGTCCGG CCAGCCTGCC
GGTCAGCGTG TACACAAGCC GTTCAAGTTC ACCGTCGCGC TGAACAAGGC CGTCCCGCTG
CTGTATAACG CGCTGGCCTC CGGCGAAATG CTGCCGACCG TGACCCTGAA GTGGTATCGC
ACTTCTGTCG AAGGCAAGCA GGAGCATTTC TTCACCACCA CCCTGACCGA CGCCACCATC
GTCGACATCA ACAACCAGAT GCCGCACTGC CAGGACCCGT CCAAGCAGGA CTACACCCAG
CTTATCGAAG TGTCGCTGGC CTACCGCAAG GTGGACTGGG AGCACACCGT CGCCGGCACC
TCCGGCTCCG ACGACTGGCG CGCGCCGATC GAAGCGTAA
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| Protein sequence | MPTPCYISIE GKTQGNITAG AFTSDSVGNI YVQGHEDEML VQEFKHIVTV PTDPQSGQPA
GQRVHKPFKF TVALNKAVPL LYNALASGEM LPTVTLKWYR TSVEGKQEHF FTTTLTDATI
VDINNQMPHC QDPSKQDYTQ LIEVSLAYRK VDWEHTVAGT SGSDDWRAPI EA
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