Gene Dd1591_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2427 
Symbol 
ID8120067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2780952 
End bp2782133 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content58% 
IMG OID644852811 
Productsugar efflux transporter 
Protein accessionYP_003004747 
Protein GI251790026 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00899] sugar efflux transporter 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTTT CTTCTGCCCG CTCAGCCCGG CGCCTGCCCG ACCTGACGTC TTCCGCATTT 
CTGGTGATCG CTTTTTTGAC CGGGATCGCC GGTGCGCTGC AACTCCCCAC GCTCAGTCTA
TTCTTGTCGA CGGAAGTACA AGCGCGTCCG TTCATGGTCG GCCTGTTTTA TACCGGCAGC
GCGATTATCG GCATCGTTGT CAGCCAAGTT CTGGCCACGT ATTCGGATCG TCAGGGCGAC
CGCAAGACAC TGATATTGCA GTGTTGCCTG TTGGGATCGC TGGCCTGTCT GCTGTATGCC
TGGAACCGTA ACTATTTTGT TCTGTTGTTT GTCGGCGTAT TGCTGTCGAG TTTCGGCTCC
ACCGCCAACC CGCAACTGTT TGCACTGGCG CGGGAACATG CCGACCGTAC CGGCCGAGGT
GCCGCGATGT TCAGCTCAGT CATGCGGGCG CAGATTTCAC TGTCATGGGT AATTGGGCCG
CCGGTTGCCT TCGCGCTGTC GCTGGGCTTC GGCTTCCCGG TGATGTACCT GACGGCGGCA
ACGGTGTTTG TGTTGTGCGG GTTACTGGTC TGGCAGCTAC TACCGTCAAT GCCGAAAACC
CGGGTGAAAT CCGCCGCGAC GCTGGAATCT CCCCGGCAGA ATCGGCGCGA TACGCTGTTA
CTGTTTAGCG CCTGTACCCT GATGTGGACC TGCAACGGGA TCTATTTGAT CAATATGCCG
TTGTATCTGG TCCATGAATT GCAGTTACCG GAAAAGCTGG CCGGCGTAAT GATGGGCACG
GCCGCCGGAC TGGAAATTCC CGTGATGCTG CTGGCCGGTT ATCTGGCTAA TCGCTTAGGT
AAACGCCTGC TGATGCGGCT GGCGGTAATC GCCGGGCTGG TTTTCTATGC CGGGCTGACG
CTGCTGAACG CCTCATGGGC ATTGTTGGCT CTGCAACTGA TGAATGCCAT TTTCATCGGT
ATTCTGGCCG GTATGGGGAT GCTGTATTTT CAGGATCTGA TGCCGGGTCA GGCCGGGGCC
GCCACGACGC TGTTCACCAA TACCACCCGG GTCGGTTGGA TCATCTCCGG ATCGCTGGCA
GGCGTAGTGG CGGAAGTGTG GAGCTATCAT GCCGGTTTCG TTATCGCCGT CGCCATGCTG
GCCGGCGCCG CCCTCTGCAT GTGGCGCATC CGCGACGTTT GA
 
Protein sequence
MTLSSARSAR RLPDLTSSAF LVIAFLTGIA GALQLPTLSL FLSTEVQARP FMVGLFYTGS 
AIIGIVVSQV LATYSDRQGD RKTLILQCCL LGSLACLLYA WNRNYFVLLF VGVLLSSFGS
TANPQLFALA REHADRTGRG AAMFSSVMRA QISLSWVIGP PVAFALSLGF GFPVMYLTAA
TVFVLCGLLV WQLLPSMPKT RVKSAATLES PRQNRRDTLL LFSACTLMWT CNGIYLINMP
LYLVHELQLP EKLAGVMMGT AAGLEIPVML LAGYLANRLG KRLLMRLAVI AGLVFYAGLT
LLNASWALLA LQLMNAIFIG ILAGMGMLYF QDLMPGQAGA ATTLFTNTTR VGWIISGSLA
GVVAEVWSYH AGFVIAVAML AGAALCMWRI RDV