Gene Dd1591_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2402 
SymbolrimO 
ID8120814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2747580 
End bp2748983 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content55% 
IMG OID644852786 
Productribosomal protein S12 methylthiotransferase 
Protein accessionYP_003004722 
Protein GI251790001 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTA ATACCTTCGA TCCATCCCAG ACCACTACAC TCTCGGCTCC GCAAAAGGCA 
CTGAGCGATC AGTCCGGCGA TGCCGGCAAG GACCTGTCCC GCAAGATTGG CTTTGTCAGC
CTCGGATGCC CGAAAAACCT GGTGGATTCT GAGCGGATCC TGACTGAGCT GCGTACTGAA
GGCTATCAGG TAGTACCGAG CTACAACGAT GCCGATCTGG TGATCGTCAA TACCTGTGGT
TTCATCGACA GCGCAGTGCA GGAGTCACTG GAAGCGATTG GCGAAGCGCT CAACGAAAAC
GGTAAGGTCA TCGTGACCGG CTGTCTGGGC GCGAAAGAGA ATCAGATCCG CGAAGTGCAT
CCAAAAGTGT TGGAAATCAC CGGCCCGCAT AGCTATGAGC AGGTACTTAA GCATGTGCAT
CATTATGTTC CCAAACCGGA ACATGACCCG TTCACCAGCT TGATCCCGGC GCAGGGTGTA
AAGCTGACGC CGCGTCATTA CGCTTACCTG AAAATTTCTG AAGGCTGCGA TCATCGCTGC
ACCTTTTGCA TTATTCCATC AATGCGCGGT GATTTAGACA GCCGCCCCAT CGGTTCGGTG
CTGGATGAAG CCAAACGGCT GGCAGAAGCC GGGGTAAAAG AATTGCTGGT GATTTCTCAG
GATACCTCTG CCTACGGTGC CGACGTCAAA CACCGTACCG GATTCTGGAA CGGCCAACCG
GTGAAAACCA GTATGGTCAG CCTGTGTGAA CAACTGGCGA CGTTAGGCAT GTGGGTTCGC
CTGCATTATG TCTACCCCTA TCCGCATGTC GATGACGTTA TCCCGCTGAT GGCGGCGGGC
AAGGTCCTGC CGTATCTGGA TATCCCGTTG CAACATGCCA GCCCGAAGGT CCTCAAGCTG
ATGAAACGGC CCGGCGCGGT CGAGCGGACG CTGGAGCGCA TCAAGCGCTG GCGTGAGATC
TGCCCTGACC TCACCTTACG CTCAACGTTT ATTGTCGGTT TCCCTGGCGA AACCGAAGAA
GATTTCCAGA TGCTGCTGGA TTTTCTGCAG GAAGCGCAGT TAGACCGCGT AGGTTGCTTC
CGCTATAGCC CGGTCGAAGG GGCTGCGGCA AACGACTTGC CGGATCACGT GCCGGAAGAC
GTGAAAGAAG ATCGTTACCA TCGCTTTATG CAGGTACAAC AACAGATTTC CAGCCAGCGT
TTGCAAGCCA AGGTTGGCCG GGAATTGAAA GTGTTGATCG ATGAGGTGGA TGACGAAGGC
GCCATTGGCC GTAGTATGGC CGATGCGCCG GAGATCGACG GTGCGGTCTA TCTGAACGGC
GAAAAACGGG TCAAGGTTGG CGACCTGGTT ACCGTAAAAA TCGAACACGC CGACGAATAC
GATCTGTGGG GCAGTCTGGT CTGA
 
Protein sequence
MTVNTFDPSQ TTTLSAPQKA LSDQSGDAGK DLSRKIGFVS LGCPKNLVDS ERILTELRTE 
GYQVVPSYND ADLVIVNTCG FIDSAVQESL EAIGEALNEN GKVIVTGCLG AKENQIREVH
PKVLEITGPH SYEQVLKHVH HYVPKPEHDP FTSLIPAQGV KLTPRHYAYL KISEGCDHRC
TFCIIPSMRG DLDSRPIGSV LDEAKRLAEA GVKELLVISQ DTSAYGADVK HRTGFWNGQP
VKTSMVSLCE QLATLGMWVR LHYVYPYPHV DDVIPLMAAG KVLPYLDIPL QHASPKVLKL
MKRPGAVERT LERIKRWREI CPDLTLRSTF IVGFPGETEE DFQMLLDFLQ EAQLDRVGCF
RYSPVEGAAA NDLPDHVPED VKEDRYHRFM QVQQQISSQR LQAKVGRELK VLIDEVDDEG
AIGRSMADAP EIDGAVYLNG EKRVKVGDLV TVKIEHADEY DLWGSLV