Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2210 |
Symbol | |
ID | 8119208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2538853 |
End bp | 2540703 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644852595 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_003004532 |
Protein GI | 251789811 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.525682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACAA TGTGGCGAAT TTTCAGTGGA ATATTCAGAT GGGGGTGGCG CCTGCTGAAT TTTACCCGCG AATTTATCCT CAACCTTTTT CTGATCTGTT TGATCCTGGT CGGTATCGGG GTCTACAGCC AGTTAAAAAC CCCGCAGGCT GAGCCGGCTC GGGGAGCGTT ACTGCTGGAT CTGACGGGGG TCGTGGTGGA TAAACCCTCC GTGAATAATA AGCTGCGTCA ATTCGGGCGC GAGTTCTTCG GCGTGTCGGC AAGCCGTCAT CAGGAGAATT CGTTGTTTGA TATTGTCGAC AGCATCCGTC AGGCCAAAGA CGACAGCAAT ATTACCGGCA TGGTGATGGA CTTGTCTGAT TTCGTCGGCG CGGATCAGCC TTCGTTGCAA TACATCGGCA AGGCGCTGCG CGAATTCCGC GATGCCGGCA AACCGATTTT TGCCGTCGGC GACAACTTCA ACCAGACGCA ATATTATCTG GCCAGCTTCG CCAATAAAAT TTACCTGACG CCGCAGGGTA ATATCGACCT GCACGGTTTC GCCACCAACA ACCTGTATTA CAAAACGTTG TTGGATAAGC TGAAGGTGAC CGCCCATATT TTCCGCGTGG GCACTTATAA GTCCGCCGTC GAGCCGTTTA TCCGCGACGA TATGTCGCCT GACGCCCGTG AGGCCGACAA CCGTTGGATT TCCACTCTGT GGCAACACTA TCTCGACACG GTAGCGGCCA ATCGCCAGAT CACCCCACAA CAGCTGTTCC CCGGTGCGGA GAAGATACTC GCCAACCTGC AAACAGTGGA TGGCGATACA GCCCGCTATG CGCTGGACAA TAAACTGGTG GACGAAGTCG CCTCCCGTTC GATGGTTGAA CAGGCGTTGA TAAAAGCCTT TGGGTGGGAC GCCAAGACCA AAAACTTCAA TTTTACCAGC ATCTATGATT ACACACCGGC GCCTCCCGCC GTCAGTACCA ACGAGATCGC CGTCGTGTTT GCCAGCGGGA CGATTGTCGA TGGTAACGAA ACGCCGGGGT ACGTCGGCGG CGACACCACC GCCGCACAGA TTCGCGATGC GCGTCTGGAC CCGAAAGTCA AAGCCATCAT CCTGCGGGTA AACAGCCCTG GCGGCAGTGT GACCGCCTCC GAGCTGATTC GCTCAGAGCT GATGGCCGCA CGGCAAGCCG GTAAACCGGT CGTCGTATCG ATGGGGGGTA TGGCCGCCTC TGGCGGTTAC TGGGTCTCCA CCCCGGCAAA CGTCATTATT GCCAGCCCCA GTACCCTGAC CGGCTCGATT GGAATTTTCG GTGTGGTGAC CACGTTTGAA AACGCGCTGG ATAGCATTGG GGTGCATACC GACGGCGTGG CGACGTCGCC ATTGGCTGAT CTGTCTCAAA CCAAGGCGTT GCCGTCACAA GCCAGCCAAC TAATGCAAAT TAGCATCGAA CGTGGTTATC AGAATTTCAT TTCACTGGTT GCTCAGTCTC GCCGGAAAAC GACGCAGGAA GTCGATGCGA TCGCTCAGGG CCATGTCTGG GTCGGCAGCG ATGCGAAAAC CAATGGGTTG GTCGATCAGT TAGGCGACTT TGACGATGCC GTGAAAAAAG CCGCGGAACT GGCCAAACTG GAACAGTATC AGCTGAGCTG GTATACCGAA GAGTCGGACT TGCTCAATGC CATGTTCACT CAGGTCAGGA GCGCCGTCTA CGCGATGCTG CCTTCCGCCT TGCAGGCGGT GATCCCCGCA CCGGTCATTC AACTGGCGCA AACCGTTCGC GCCCAGACAT CGATTCTGGA TGCCCTGAAT GATCCGCAAA ATCGTTATGC TTTGTGCCTG AATTGCGGCG ACCTACGCTA A
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Protein sequence | MRTMWRIFSG IFRWGWRLLN FTREFILNLF LICLILVGIG VYSQLKTPQA EPARGALLLD LTGVVVDKPS VNNKLRQFGR EFFGVSASRH QENSLFDIVD SIRQAKDDSN ITGMVMDLSD FVGADQPSLQ YIGKALREFR DAGKPIFAVG DNFNQTQYYL ASFANKIYLT PQGNIDLHGF ATNNLYYKTL LDKLKVTAHI FRVGTYKSAV EPFIRDDMSP DAREADNRWI STLWQHYLDT VAANRQITPQ QLFPGAEKIL ANLQTVDGDT ARYALDNKLV DEVASRSMVE QALIKAFGWD AKTKNFNFTS IYDYTPAPPA VSTNEIAVVF ASGTIVDGNE TPGYVGGDTT AAQIRDARLD PKVKAIILRV NSPGGSVTAS ELIRSELMAA RQAGKPVVVS MGGMAASGGY WVSTPANVII ASPSTLTGSI GIFGVVTTFE NALDSIGVHT DGVATSPLAD LSQTKALPSQ ASQLMQISIE RGYQNFISLV AQSRRKTTQE VDAIAQGHVW VGSDAKTNGL VDQLGDFDDA VKKAAELAKL EQYQLSWYTE ESDLLNAMFT QVRSAVYAML PSALQAVIPA PVIQLAQTVR AQTSILDALN DPQNRYALCL NCGDLR
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