| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2208 |
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| Symbol | |
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| ID | 8119206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2536031 |
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| End bp | 2537956 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644852593 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_003004530 |
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| Protein GI | 251789809 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.948709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTGT TTATTGCAGA AAAACCCAGC CTTGCCAGAG CCATTGCCGA TGTGTTGCCG
AAACCGCATC GGCGTGGTGA TGGCTTCATT GCCTGCGGCG ACCAGGATAC GGTGACCTGG
TGCGTGGGAC ACCTGCTGGA ACAGGCTCAA CCGGATGCCT ACGACGCCCG TTATGCACGC
TGGTCGCTGA CGGACCTACC GATAGTGCCG CAGAAATGGC TGCTCCAGCC GCGGCCATCT
GTCAGTAAGC AACTGAATGT GATTAAAAAA TTACTGACGC AAGCCGATGA GATCATCCAT
GCCGGCGACC CGGACCGGGA AGGGCAGTTA CTGGTGGATG AAGTGCTGGA GTATCTGGCG
TTGTCGGAAG AGAAACGCCA GCACGTGCGC CGTTGTCTGA TCAACGACTT AAACCCGCAA
GCGGTAGAGC GTGCGGTGTC GCGTCTGCGC GAAAACCGGG AGTTTGTGCC GCTGTGCGTT
TCGGCATTGG CACGTTCACG CGCCGACTGG TTGTACGGTA TTAATATGAC CCGCGCTTAT
ACGTTACTTG GGAAGAATGC CGGTTATGAA GGCGTGCTGT CGGTCGGTCG GGTTCAAACG
CCGGTTTTGG GTCTGGTGGT GCGGCGTGAC GAAGAGATCG ACAATTTTGT ACCTCGCGAC
TATTTCGAGG TTAAGGCGCA CATCGTTACT CCAGCCAACG AGCGGTTCGT TGCGTTGTGG
CAGCCCAGTG AGTCGTGCGA GCCGTATCAG GACGACGAGG GGCGTTTACT GCATCGCCCG
TTGGCTGAGC ACGTCGTCAA GCGCATCGAA GGGCAACCGG CATGGGTGAC CGCCTATAAT
GATAAACGGG AATCGGAAAC CGCGCCGTTG CCGTATTCCC TTTCCGCCTT GCAGATTGAA
GCGGCCAAAC GCTTTGGCCT GAGTGCCCAG CAGGTGCTGG ATATCTGCCA GCGTCTGTAT
GAGACGCACA AATTGATTAC CTACCCGCGT TCGGACTGTC GGTACTTACC GGAAGAGCAT
TTCGCCGGGC GACAGGCGGT GCTGAACGCG ATTGCGACAC ATCGGCCGGA TTTATTGCCG
CAACCGGCGG TTGATCCTGA GCGCCGCAAT CGTTGCTGGG ATGACGGCAA GGTCGATGCT
CACCACGCCA TTATTCCCAC GGCACGCAGT GCCCGAACGT CGTTGACCGA ACAGGAAAGT
CAGGTCTACG GGCTGGTTGC CCGGCAATAC CTGATGCAGT TCTGCGCAGA TGCGGTATTT
CGTAAATGCG TTATCGATCT GGATATTGCC GGCGGCAAGT TTGTCGCTAA GGCCCGGTTT
CTGGCTGAGG CGGGATGGCG TACGTTGCTC GGCAACAAAG AGCGAGATGA GGAAAACGAA
GGTATGCCGT TGCCGGTGGT GGCGAAAGGC GATGAATTGC TGTGCGAACG GGGTGAAGTG
GTGGAACGAC AGACTCAGCC GCCGCGGCCG TTTACCGATG CTACGTTGTT GTCCGCCATG
ACCGGTATTG CCCGCTTCGT TCAGGACAAG GCGTTGAAGA AAATTCTGCG CGAAACCGAT
GGACTAGGCA CTGAAGCCAC ACGCGCAGGT ATTATCGAGC TACTGTTTAA GCGTGCCTTT
TTAATCAAGA AAGGGCGTTA TATTCATTCC ACCGATGCGG GCAAAGCCTT GATCCATGCC
TTGCCGCCGA TAGCGGCTCA TCCGGATATG ACCGCACACT GGGAAGCGAC GTTGACGCAG
ATTAGCGAGA AGCGTTGCCG CTATCAGGAC TTCATGCAGC CATTGACGCA ATCATTGTAT
GAACTTATTC AGCAGGCCCG GCAAAGTGGT AATATCCAGG CATTCAGAGG ATTACCGGCG
GTTAAGCGCG CTACGCCCGA AAAGCGGAAA CGCCGTCAGT CACGTTCAGC CAGCACCAAG
GAGTAA
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| Protein sequence | MRLFIAEKPS LARAIADVLP KPHRRGDGFI ACGDQDTVTW CVGHLLEQAQ PDAYDARYAR
WSLTDLPIVP QKWLLQPRPS VSKQLNVIKK LLTQADEIIH AGDPDREGQL LVDEVLEYLA
LSEEKRQHVR RCLINDLNPQ AVERAVSRLR ENREFVPLCV SALARSRADW LYGINMTRAY
TLLGKNAGYE GVLSVGRVQT PVLGLVVRRD EEIDNFVPRD YFEVKAHIVT PANERFVALW
QPSESCEPYQ DDEGRLLHRP LAEHVVKRIE GQPAWVTAYN DKRESETAPL PYSLSALQIE
AAKRFGLSAQ QVLDICQRLY ETHKLITYPR SDCRYLPEEH FAGRQAVLNA IATHRPDLLP
QPAVDPERRN RCWDDGKVDA HHAIIPTARS ARTSLTEQES QVYGLVARQY LMQFCADAVF
RKCVIDLDIA GGKFVAKARF LAEAGWRTLL GNKERDEENE GMPLPVVAKG DELLCERGEV
VERQTQPPRP FTDATLLSAM TGIARFVQDK ALKKILRETD GLGTEATRAG IIELLFKRAF
LIKKGRYIHS TDAGKALIHA LPPIAAHPDM TAHWEATLTQ ISEKRCRYQD FMQPLTQSLY
ELIQQARQSG NIQAFRGLPA VKRATPEKRK RRQSRSASTK E
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