Gene Dd1591_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2192 
SymboloppD 
ID8119189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp2517047 
End bp2518036 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content54% 
IMG OID644852576 
Productoligopeptide transporter ATP-binding component 
Protein accessionYP_003004514 
Protein GI251789793 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0133758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA CGTCAGAAAC CCGCGACGCG CTGCTGGATG TTAAAGACTT GCGCGTCACT 
TTTGGTACGC CTGATGGTGA TGTCACGGCG GTAAATGATC TTAATTTCTC GCTCAGCGCC 
GGTGAAACGC TAGGTATTGT CGGAGAGTCG GGGTCCGGCA AATCTCAGAC CGCGTTCGCT 
CTGATGGGGT TGCTGGCTGC CAATGGTCGT ATTGGCGGCT CCGCCCGCTT TAATGGTCGT 
GAAATTCTTA ATCTGCCTGA GCGTGAACTG AACCGTTTGC GGGCGGAAGA GATCGCCATG 
ATTTTTCAGG ACCCGATGAC GTCACTGAAT CCGTATATGC GCGTCGGCGA CCAGTTGATG 
GAAGTGCTGA TGCAGCATAA GAAAATGGGC AAAAGCGATG CGTTTGAAGA GTCGGTACGT 
ATGCTGGATG CGGTGAAAAT GCCGGAAGCC AGAAAGCGGA TGCGCATGTA TCCGCATGAG 
TTTTCCGGCG GGATGCGCCA GCGTGTGATG ATTGCCATGG CCCTGCTGTG CCGACCTAAA 
TTGTTGATCG CCGACGAACC GACTACCGCG CTTGATGTGA CGGTTCAGGC ACAGATTATG 
ACGTTGCTCA ATGACCTGAA GCGTGAGTTC AACACCGCGA TTATTATGAT TACTCACGAC 
CTGGGGGTCG TCGCCGGTAT TTGCGACAAG GTTCTGGTGA TGTACGCCGG TCGTACCATG 
GAGTACGGCA GTGCGCGCGA AATTTTCTAT GAGCCGACCC ATCCGTACTC TCTCGGTTTG 
CTGAAAGCGA TTCCTCGCCT TGATGAAGAG AATGAGGAAC TGGCCACTAT TCCGGGAAAT 
CCGCCTAACT TGTTACGCCT GCCGAAAGGA TGCCCTTTCC AGCCGCGTTG TCCCTATGCA 
CAGGAGCAGT GCCAGTATGC ACCTGAGTTG ACGCCGTTTG GTGAAGGCCG TCTGCGTGCC 
TGTTTCCGGA GTGTGGGAGA ATTAGTATGA
 
Protein sequence
MMNTSETRDA LLDVKDLRVT FGTPDGDVTA VNDLNFSLSA GETLGIVGES GSGKSQTAFA 
LMGLLAANGR IGGSARFNGR EILNLPEREL NRLRAEEIAM IFQDPMTSLN PYMRVGDQLM 
EVLMQHKKMG KSDAFEESVR MLDAVKMPEA RKRMRMYPHE FSGGMRQRVM IAMALLCRPK 
LLIADEPTTA LDVTVQAQIM TLLNDLKREF NTAIIMITHD LGVVAGICDK VLVMYAGRTM 
EYGSAREIFY EPTHPYSLGL LKAIPRLDEE NEELATIPGN PPNLLRLPKG CPFQPRCPYA 
QEQCQYAPEL TPFGEGRLRA CFRSVGELV