Gene Dd1591_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2180 
Symbol 
ID8118223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp2507118 
End bp2507750 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content50% 
IMG OID644852564 
Productouter membrane protein W 
Protein accessionYP_003004502 
Protein GI251789781 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.41802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TTGCTTTACT GATGATAGCA GCGGCGATGA TTCCTGCACT GGCAGAGGCT 
CATCAGGCTG GCGATGTGAT CGTACGTGCC GGAACAGCAA CGGTACGCCC CAATGCGGGT 
TCTGATGATG TGCTGGGGCT GGGATCATTC AATGTGAATA ACAATACCCA GCTTGGTCTG 
ACCTTTAGCT ACATGGCAAC GGATAATATC GGTGTAGAAC TGCTGGCAGC GACGCCGTTT 
CAGCATAAAG TCGGCGTGGG CGGTGTTGGG CAGATCGCCG AAGTGAAGCA TTTACCGCCA 
ACACTGATGG CCCAGTATTA TTTCGGGCAG AGCGCCGATA AACTGCGCCC TTATCTGGGT 
GTCGGCCTGA ACTACACCAC CTTCTTTGAT GAGAAGTTTA ACCAAACAGG GAAAGATGCC 
GGGTTGACGG ATCTGAACCT GAAAAGCTCC TGGGGCGTTG CCGCACAGGC AGGTCTGGAT 
TACAACCTGA ATAAAGACTG GTTGTTAAAT ATGTCGGTAT GGTGGATGGA TATCGATACT 
ACCGTGAAAT TCAAAGCGGC AGGTCAGGAT CAGAGCATCA AAACCCGTTT GGACCCTTGG 
GTATTCATGT TTGGTTTTGG TTACAAGTTC TGA
 
Protein sequence
MKKVALLMIA AAMIPALAEA HQAGDVIVRA GTATVRPNAG SDDVLGLGSF NVNNNTQLGL 
TFSYMATDNI GVELLAATPF QHKVGVGGVG QIAEVKHLPP TLMAQYYFGQ SADKLRPYLG 
VGLNYTTFFD EKFNQTGKDA GLTDLNLKSS WGVAAQAGLD YNLNKDWLLN MSVWWMDIDT 
TVKFKAAGQD QSIKTRLDPW VFMFGFGYKF