Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2133 |
Symbol | |
ID | 8118176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2453111 |
End bp | 2454328 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644852517 |
Product | ROK family protein |
Protein accession | YP_003004455 |
Protein GI | 251789734 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTGTCA GTGGTCAGCC GGGACACATC GATCAGATCA AGCAGATGAA TGCAGGTGGC GTTTATCGAC TGATCGACGA ACATGGCCCC ATTTCCCGTA TTGAGTTGTC AAAACAGGCT CAACTTGCTC CTGCCAGCAT TACCAAAATT GTGCGTGAAC TGATGGAAGC GCATCTGGTT CGGGAAACCG AATATCAGGA AATGGGTAGC CGAGGCCGGC CAGCGATTGG GCTGGTGTTG GATACAGAAG CCTGGCATTA CCTGTCGGTG CGAATCAGTA ACCAGGTCAT GACGCTCGCG CTGCGTGACC TGAGTGGTCA TTTGGTAGTG GAAGAGCAGG TCGATTTACC CAGCGAGCAT CATCAGCCGT TGTTGGAGCG GATTCTGACT GAAATCGATC AGTTTTTTAT CCGTCACCAG CGAAAACTGG AACGATTGAC CGCCATCGCT ATTACGTCGC CTGGGATGGT GGATTCATCC ACCGGCATTA TCCATCGTAT GCCTTTTTAC CATGTGGAAG AAATGGCGAT TGGCCCGGCG CTGGAAAAGC GCACGGGCTT GCCCGTCTAT CTGCAACATG ATATTTGTGC CTGGACTATG GCGGAAGCGC TGTTTGGCGG ATCACGCGGC TGCCAAAACG TCATTCAGAT TGTTATTGAT CACAATGTCG GCGCAGGCGT GATTACCGGC GGCCGCATTC TACATGCCGG CAGCCGGACG CTGGTGGAAA TAGGTCATAC CCAGGTTGAT CCTTATGGCA AACGCTGTTA TTGCGGCAAC CACGGCTGCC TGGAAACCGT CGCCAGTATT GAAAGTATGC TGGAGCTGGC GCAACAGCGC CTGAAAGGTT CGATGAGTTC ACTGTTGCAC GGCTCGCCGC TGACGGTCGA ATCTCTGTGC GACGCGGCGT TAAAAGGCGA TCAACTGGCA AAGGATATTA TTGTTGATGT GGGGAATAAC GTGGGCCGGA TTGCCGCCAT CATGGTTAAC CTGTTTAATC CGGAAAAAAT TCTGATTGGC TCGCCGCTGA ATCAGGCGGC CGACATTTTG TATCCCGCTA TCCTTGACTG CATTCGCCGT CAGGCATTAC CGGCTTATAG CCATCACCTG CAAGTCACAT CGACCCATTT CTATAATCAG GGTACGGTTC CCGGCGCGGC GCTCATCAAA GATGCGCTCT ATAACGGCTC ATTGCTGATT AAGCTGATGC AGGGCTAA
|
Protein sequence | MIVSGQPGHI DQIKQMNAGG VYRLIDEHGP ISRIELSKQA QLAPASITKI VRELMEAHLV RETEYQEMGS RGRPAIGLVL DTEAWHYLSV RISNQVMTLA LRDLSGHLVV EEQVDLPSEH HQPLLERILT EIDQFFIRHQ RKLERLTAIA ITSPGMVDSS TGIIHRMPFY HVEEMAIGPA LEKRTGLPVY LQHDICAWTM AEALFGGSRG CQNVIQIVID HNVGAGVITG GRILHAGSRT LVEIGHTQVD PYGKRCYCGN HGCLETVASI ESMLELAQQR LKGSMSSLLH GSPLTVESLC DAALKGDQLA KDIIVDVGNN VGRIAAIMVN LFNPEKILIG SPLNQAADIL YPAILDCIRR QALPAYSHHL QVTSTHFYNQ GTVPGAALIK DALYNGSLLI KLMQG
|
| |