Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2107 |
Symbol | |
ID | 8118150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2424779 |
End bp | 2426506 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644852492 |
Product | type I secretion system ATPase |
Protein accession | YP_003004430 |
Protein GI | 251789709 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCTT CCTTTGAGCA AGATCGTTCG TTGTTCGGCG TGTTGCGCCG ATTCCGTCGT AGTTTCTGGA GCGTCGGAAT ATTCAGCGCC GTGATTAACC TGCTGATGTT GGCGCCTTCG GTTTATATGC TACAGGTGTA TGACCGGGTA CTGGCTTCCG GCAACGGCAT TACCCTGCTG ATGCTGACGC TGCTGATGGT AGGGCTATGT GCCTTTATGG GTGCGCTGGA GTGGGTTCGT AGCCTGCTGG TGGTACGGTT AGGCACGCGT ATCGATCTGG CGCTCAATCA GGATGTTTTC AATGCGGCGT TTGCCCGCAA TCTGGAAGCC GGCGACGGCC GCGCCGGTTT GGCGTTGACC GATCTTACCC TGCTGCGTCA GTTTATTACC GGCAACGCAT TGTTTGCCTT CTTTGATGTG CCGTGGTTTC CATTATTTCT GCTGGTACTG TTTTTACTCC ACCCTTGGCT GGGATTGCTG GCGTTGGGGG GAACCGTCGT GTTGGTTGCG CTGACCTGGC TGAACCAGCG TTTGACCAAT CAGCCGTTGG CGGAGGCGAA TCAGCATTCG CAGCAGGCAA CCCATCTGGC CGATGCGCAA CTGCGCAATG CCGATGTGAT TGAAGCCATG GGGATGCTCG GCAACCTGCG TCGGCGCTGG CTGACGCGTC ATTATCGATT TATTTCCCTA CAGAACCTCG CCAGCGAACG TGCTGCAGCG GTAGGCGGCG CCTCCAAATA CAGCCGTATC GCATTGCAAT CATTGATGCT GGGGTTAGGG GCGTTGCTGG CGATCGACGG CAAAATTACG CCGGGGATGA TGATCGCCGG GTCCATTTTG GTTGGCCGGG TGCTGAGCCC TATTGATCAA TTGATTGCAG TCTGGAAACA GTGGAGCAGT GCACGCATCG CCTGGCAGCG GCTGACCAAA CTGATCGCCG CCTATCCGCC ACGACCGACG ACCATGGCGC TGCCCGCGCC GGAAGGACAT CTTGGCGTCG AGCAGGTGTC GCTGCGTTCG GCGCAAGGCC ATGCCCGGTT GCAGAATATC CATTTCTCAC TGCAGGCCGG CGAAACGCTG GTGATTCTTG GGTCGTCCGG CTCGGGTAAA TCTACGCTGG CACGGTTATT GGTTGGCGCA CAGGCGCCGA CGCAAGGCAA GGTGCGTCTG GACGGCGCCG ACCTGAATCA GATGGATAAA AGTGCTTTTG GCCCGTCCAT AGGGTATTTG CCGCAGGATG TGCAGTTGTT TAAAGGCACG CTGGCGGAAA ACATTGCCCG TTTTGGCGAG GCTGACCCGC AAAAAGTAGT GGCGGCGGCA AAACTGGCCG GCGTACACGA GCTGATCCTC TCTTTACCGA ATGGCTATGA CACGGAGTTG GGCGATGGGG GGAGCGGTCT GTCCGGCGGC CAGCGACAGC GTATCGGTTT GGCGCGCGCT ATGTACGACG ATCCTTGCCT GTTGGTTCTC GATGAACCCA ATTCCAGCCT GGATAGCGAA GGCGATCAGG CGCTGATGCA GGCGATTGTT GCATTGCAGA AACGCGGTGC CACGGTGGTG TTGATCACCC ATCGTCCGGC GCTGACCACG CTGGCGCAAA AGATTTTGAT CCTCCACGAG GGCCAGCAGC AGCGTATGGG GCTGGCGCGA GATGTGCTGA CGGAATTGCA ACAGCGTAGC GCCGCGAATC AGGCCCGGAT GACGACTCCG GCTGCGATGC CGCAATGA
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Protein sequence | MNASFEQDRS LFGVLRRFRR SFWSVGIFSA VINLLMLAPS VYMLQVYDRV LASGNGITLL MLTLLMVGLC AFMGALEWVR SLLVVRLGTR IDLALNQDVF NAAFARNLEA GDGRAGLALT DLTLLRQFIT GNALFAFFDV PWFPLFLLVL FLLHPWLGLL ALGGTVVLVA LTWLNQRLTN QPLAEANQHS QQATHLADAQ LRNADVIEAM GMLGNLRRRW LTRHYRFISL QNLASERAAA VGGASKYSRI ALQSLMLGLG ALLAIDGKIT PGMMIAGSIL VGRVLSPIDQ LIAVWKQWSS ARIAWQRLTK LIAAYPPRPT TMALPAPEGH LGVEQVSLRS AQGHARLQNI HFSLQAGETL VILGSSGSGK STLARLLVGA QAPTQGKVRL DGADLNQMDK SAFGPSIGYL PQDVQLFKGT LAENIARFGE ADPQKVVAAA KLAGVHELIL SLPNGYDTEL GDGGSGLSGG QRQRIGLARA MYDDPCLLVL DEPNSSLDSE GDQALMQAIV ALQKRGATVV LITHRPALTT LAQKILILHE GQQQRMGLAR DVLTELQQRS AANQARMTTP AAMPQ
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