Gene Dd1591_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2107 
Symbol 
ID8118150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2424779 
End bp2426506 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content58% 
IMG OID644852492 
Producttype I secretion system ATPase 
Protein accessionYP_003004430 
Protein GI251789709 
COG category[R] General function prediction only 
COG ID[COG4618] ABC-type protease/lipase transport system, ATPase and permease components 
TIGRFAM ID[TIGR01842] type I secretion system ABC transporter, PrtD family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCTT CCTTTGAGCA AGATCGTTCG TTGTTCGGCG TGTTGCGCCG ATTCCGTCGT 
AGTTTCTGGA GCGTCGGAAT ATTCAGCGCC GTGATTAACC TGCTGATGTT GGCGCCTTCG
GTTTATATGC TACAGGTGTA TGACCGGGTA CTGGCTTCCG GCAACGGCAT TACCCTGCTG
ATGCTGACGC TGCTGATGGT AGGGCTATGT GCCTTTATGG GTGCGCTGGA GTGGGTTCGT
AGCCTGCTGG TGGTACGGTT AGGCACGCGT ATCGATCTGG CGCTCAATCA GGATGTTTTC
AATGCGGCGT TTGCCCGCAA TCTGGAAGCC GGCGACGGCC GCGCCGGTTT GGCGTTGACC
GATCTTACCC TGCTGCGTCA GTTTATTACC GGCAACGCAT TGTTTGCCTT CTTTGATGTG
CCGTGGTTTC CATTATTTCT GCTGGTACTG TTTTTACTCC ACCCTTGGCT GGGATTGCTG
GCGTTGGGGG GAACCGTCGT GTTGGTTGCG CTGACCTGGC TGAACCAGCG TTTGACCAAT
CAGCCGTTGG CGGAGGCGAA TCAGCATTCG CAGCAGGCAA CCCATCTGGC CGATGCGCAA
CTGCGCAATG CCGATGTGAT TGAAGCCATG GGGATGCTCG GCAACCTGCG TCGGCGCTGG
CTGACGCGTC ATTATCGATT TATTTCCCTA CAGAACCTCG CCAGCGAACG TGCTGCAGCG
GTAGGCGGCG CCTCCAAATA CAGCCGTATC GCATTGCAAT CATTGATGCT GGGGTTAGGG
GCGTTGCTGG CGATCGACGG CAAAATTACG CCGGGGATGA TGATCGCCGG GTCCATTTTG
GTTGGCCGGG TGCTGAGCCC TATTGATCAA TTGATTGCAG TCTGGAAACA GTGGAGCAGT
GCACGCATCG CCTGGCAGCG GCTGACCAAA CTGATCGCCG CCTATCCGCC ACGACCGACG
ACCATGGCGC TGCCCGCGCC GGAAGGACAT CTTGGCGTCG AGCAGGTGTC GCTGCGTTCG
GCGCAAGGCC ATGCCCGGTT GCAGAATATC CATTTCTCAC TGCAGGCCGG CGAAACGCTG
GTGATTCTTG GGTCGTCCGG CTCGGGTAAA TCTACGCTGG CACGGTTATT GGTTGGCGCA
CAGGCGCCGA CGCAAGGCAA GGTGCGTCTG GACGGCGCCG ACCTGAATCA GATGGATAAA
AGTGCTTTTG GCCCGTCCAT AGGGTATTTG CCGCAGGATG TGCAGTTGTT TAAAGGCACG
CTGGCGGAAA ACATTGCCCG TTTTGGCGAG GCTGACCCGC AAAAAGTAGT GGCGGCGGCA
AAACTGGCCG GCGTACACGA GCTGATCCTC TCTTTACCGA ATGGCTATGA CACGGAGTTG
GGCGATGGGG GGAGCGGTCT GTCCGGCGGC CAGCGACAGC GTATCGGTTT GGCGCGCGCT
ATGTACGACG ATCCTTGCCT GTTGGTTCTC GATGAACCCA ATTCCAGCCT GGATAGCGAA
GGCGATCAGG CGCTGATGCA GGCGATTGTT GCATTGCAGA AACGCGGTGC CACGGTGGTG
TTGATCACCC ATCGTCCGGC GCTGACCACG CTGGCGCAAA AGATTTTGAT CCTCCACGAG
GGCCAGCAGC AGCGTATGGG GCTGGCGCGA GATGTGCTGA CGGAATTGCA ACAGCGTAGC
GCCGCGAATC AGGCCCGGAT GACGACTCCG GCTGCGATGC CGCAATGA
 
Protein sequence
MNASFEQDRS LFGVLRRFRR SFWSVGIFSA VINLLMLAPS VYMLQVYDRV LASGNGITLL 
MLTLLMVGLC AFMGALEWVR SLLVVRLGTR IDLALNQDVF NAAFARNLEA GDGRAGLALT
DLTLLRQFIT GNALFAFFDV PWFPLFLLVL FLLHPWLGLL ALGGTVVLVA LTWLNQRLTN
QPLAEANQHS QQATHLADAQ LRNADVIEAM GMLGNLRRRW LTRHYRFISL QNLASERAAA
VGGASKYSRI ALQSLMLGLG ALLAIDGKIT PGMMIAGSIL VGRVLSPIDQ LIAVWKQWSS
ARIAWQRLTK LIAAYPPRPT TMALPAPEGH LGVEQVSLRS AQGHARLQNI HFSLQAGETL
VILGSSGSGK STLARLLVGA QAPTQGKVRL DGADLNQMDK SAFGPSIGYL PQDVQLFKGT
LAENIARFGE ADPQKVVAAA KLAGVHELIL SLPNGYDTEL GDGGSGLSGG QRQRIGLARA
MYDDPCLLVL DEPNSSLDSE GDQALMQAIV ALQKRGATVV LITHRPALTT LAQKILILHE
GQQQRMGLAR DVLTELQQRS AANQARMTTP AAMPQ