Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2067 |
Symbol | |
ID | 8119544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2378194 |
End bp | 2378979 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644852454 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_003004392 |
Protein GI | 251789671 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0425757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACTTG CAACGTATTT TGTTCGTCTC ATCATCGCTA TTACCGTATT CTCGGTATCT GCTATTGCGG GGGCGGCCCA GGAAACGCAA AAACAGGAAA AGATATTAAT CGTCGTCTCC AGTCTGGATA AAAAAACAGA AAATCTCGTG GGGGGATTTT GGTTTCCAGA ATTGACTCAT CCCGTCAAAG TTTTTGATAA AGCGGGTGTT GATTTCGATA TTGCAAGTCC TAAAGGAGGA TTGGCTCCTT TCGATGGTTT TGACCTGAAA GATCAGGCTA GCCTGGAGTT TTGGACCAAC CCTCAACACC GAAATAAGCT TGGTCAAACG ATTAAATTAT CGGATATTGA TCCATCAAAA TATTCCGCGA TTCTGCTTGT CGGTGGTCAT GGTCCGATGT GGGATTTTGT CAATAATACT GAGCTCAGCA ATATTGTGCG CACGCTGTAC GAAAACAATG GTGTGATTAG TGCCGTGTGC CATGGTCCGG CAGGGCTCAT CAATGTAAAA CTCAGCAACG GTGAAGACTT AATCAAAGGT CGCCGTCTTA CAGGATTTAC GGCAGCGGAA GAGGCTTCCC GGCAGTACGA CAAGATAGTG CCATTTGAAC TGCAAGGCGC GCTGAAGAAA GCCGGAGCAA CGTTTGAAGA AGCGCCAATA TTTGCGAACA ATGTGGTTGT TGATGGGCGC TTAATCACCG GGCAAAACCC AGCTTCGGCA ACGGCGCTTG GGGAAGCCGT GGTTAAAGCG TTACAAGCCA AGACTCAGCG TAAAGCGGCG CTATAA
|
Protein sequence | MSLATYFVRL IIAITVFSVS AIAGAAQETQ KQEKILIVVS SLDKKTENLV GGFWFPELTH PVKVFDKAGV DFDIASPKGG LAPFDGFDLK DQASLEFWTN PQHRNKLGQT IKLSDIDPSK YSAILLVGGH GPMWDFVNNT ELSNIVRTLY ENNGVISAVC HGPAGLINVK LSNGEDLIKG RRLTGFTAAE EASRQYDKIV PFELQGALKK AGATFEEAPI FANNVVVDGR LITGQNPASA TALGEAVVKA LQAKTQRKAA L
|
| |