Gene Dd1591_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2060 
Symbol 
ID8119537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2372111 
End bp2372923 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID644852447 
Productshort chain dehydrogenase 
Protein accessionYP_003004385 
Protein GI251789664 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA AACGTGTCGC GCTGGTGACG GGTGCCTCAT CAGGCATCGG CGAGGCCACG 
GCCATCAAAC TTGTTGCAGT TGGCTACAGC GTCTACGGCA CTAGCCGACG TGGGGCAGAA
TCGAGTGAAG CTCGCTTTCC GATGCTGGCG CTTGACGTGA CAAATGATGA ATCTGTAGAA
AACGCTGTTG CTGAATTGCT TCGCCTTGAG GGACGCATCG ATCTTTTGGT TAACAATGCA
GGATTTGGAT TTTCACCAGC CGCCGCAGAG GAAAGCTCGA TTGAGCAAGC CAAGGCCATG
TTCGACACCA ATTTTCATGG CCTTGTCAGA ATGACGCGCA CCGTCGTGCC TTATATGCGT
CGCCAGGGCG GCGGCAGAAT CATCAATATC GGATCTATTC TTGGTGTTGT TCCCGTCCCT
TATGCGGCGC TTTATTGTGC CAGTAAACAT GCCGTTGAAG GTTACTCAGA AGCCTTGGAT
CATGAATTGC GCACACAGGG TATAAGAGTA TCGGTGATTG AACCAGCGTA TGTAAAAACC
AAATTTGAGG TCAACAACAT CGAACCTGAC TCGAAGATCG GCGAGTACGA CGTTATTCGA
GCAAAGTTAG TTCATGTTGT TAGTGAGGCC ATGTCTAAGG CCGACGAGCC AGAGGAGGCT
GCCGATGTGG TGGTAAAAGC GGCTCAAGCG TCAAACCCGA AGCTACGCTA TACCTCGGGG
AAAACGGCCC GCATGTTTGC GTTTTTACGT CGTTTTGCCC CGGCGTCGGT ATTGGATAAA
GGAATACGTA AAAATCTGCA ACTTGATGCT TAA
 
Protein sequence
MTNKRVALVT GASSGIGEAT AIKLVAVGYS VYGTSRRGAE SSEARFPMLA LDVTNDESVE 
NAVAELLRLE GRIDLLVNNA GFGFSPAAAE ESSIEQAKAM FDTNFHGLVR MTRTVVPYMR
RQGGGRIINI GSILGVVPVP YAALYCASKH AVEGYSEALD HELRTQGIRV SVIEPAYVKT
KFEVNNIEPD SKIGEYDVIR AKLVHVVSEA MSKADEPEEA ADVVVKAAQA SNPKLRYTSG
KTARMFAFLR RFAPASVLDK GIRKNLQLDA