Gene Dd1591_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1994 
Symbol 
ID8119311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2279075 
End bp2280196 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content56% 
IMG OID644852384 
Productribonuclease D 
Protein accessionYP_003004322 
Protein GI251789601 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.045905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTATC AGTTGATTAC TACCGATGAA GGATTATCAG CGGTGTGCGC GCAGGCGTGC 
GCGGTTTCCG AGGTAGCGCT GGACACCGAA TTTGTCCGTA CTCGTACCTA TTACCCGCAA
CTGGGGCTGA TTCAGTTGTA TGACGGTGAC AATCTGTCGT TGATAGACCC GCTGGCGATC
CGCGATTGGG CACCGTTTCG CGCGTTGTTG CAGAATCCGC AAATCACCAA ATTTCTTCAT
GCCGGCAGTG AAGATTTAGA AGTTTTTCTG AACGCGTTTG GTTGCCTGCC GTCGCCTTTC
ATCGATAGCC AGATTCTGGC GGCATTTCTG GGCAAGCCGC TGTCTTATGG TTTTGCTGCG
TTGGTGGCGG ACTACCGGCA AGTGGCACTG GATAAAAGTG AATCCCGTAC CGACTGGCTG
GCGCGTCCGC TGAGCGAAAA GCAATGTCAG TACGCGGCCG CGGATGTGTT TTACCTGCTG
CCGGTAGCCA GAACGTTGGT CGCAGAGACG CGCGCCGCGG GTTGGCTGGA TGCGGCGCTG
GATGAGTGCC GGTTATTGTG TCAGCGCCGT CAGGAGGTGT TGGCGCCGGA GATGGCGTAT
CGGGAGATCG GTAATGCCTG GCAATTGAGA GGGCGCCATC TGGCCTGTTT GCAAAAACTG
GCGGCATGGC GTTTGCGCAA AGCGCGTGAG CGCGATAGCG CCGTCAATTT TATTGTCCGT
GAAGAGAACC TGTGGCAGGT CGCCCGTTGC CTGCCGGGTT CACTTGGGGA GCTTGATTCG
CTAGGACTGA GCGGGCCGGA AATTCGTTAT CACGGTAAGA CGTTGCTGGC GCTGGTGGCG
GAAAGCGCGT CGTTAAGCGA AGCGGATTAC CCGCCGGCGG TGGTCAATTT GATCGATTAT
CCCGGCTATA AGAAAGCGTT TCGCGATATC AAAGCGTTGG TGCAGCAGAG TGCGGAACAG
AGTGGCTTGT CGGCCGAGCT GTTGGCATCC CGGCGGCAAA TTAACCGCTT GCTGAACTGG
CACTGGAAAT TGGTCGTGAC GGAATGCGAA CCCGAAATGA TCTCCGGGTG GCGTGGGCGT
TTGTTCGGGC CTGGCTTGAA AACGATTCTG GCGGATTATT GA
 
Protein sequence
MNYQLITTDE GLSAVCAQAC AVSEVALDTE FVRTRTYYPQ LGLIQLYDGD NLSLIDPLAI 
RDWAPFRALL QNPQITKFLH AGSEDLEVFL NAFGCLPSPF IDSQILAAFL GKPLSYGFAA
LVADYRQVAL DKSESRTDWL ARPLSEKQCQ YAAADVFYLL PVARTLVAET RAAGWLDAAL
DECRLLCQRR QEVLAPEMAY REIGNAWQLR GRHLACLQKL AAWRLRKARE RDSAVNFIVR
EENLWQVARC LPGSLGELDS LGLSGPEIRY HGKTLLALVA ESASLSEADY PPAVVNLIDY
PGYKKAFRDI KALVQQSAEQ SGLSAELLAS RRQINRLLNW HWKLVVTECE PEMISGWRGR
LFGPGLKTIL ADY