Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1994 |
Symbol | |
ID | 8119311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2279075 |
End bp | 2280196 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644852384 |
Product | ribonuclease D |
Protein accession | YP_003004322 |
Protein GI | 251789601 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.045905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTATC AGTTGATTAC TACCGATGAA GGATTATCAG CGGTGTGCGC GCAGGCGTGC GCGGTTTCCG AGGTAGCGCT GGACACCGAA TTTGTCCGTA CTCGTACCTA TTACCCGCAA CTGGGGCTGA TTCAGTTGTA TGACGGTGAC AATCTGTCGT TGATAGACCC GCTGGCGATC CGCGATTGGG CACCGTTTCG CGCGTTGTTG CAGAATCCGC AAATCACCAA ATTTCTTCAT GCCGGCAGTG AAGATTTAGA AGTTTTTCTG AACGCGTTTG GTTGCCTGCC GTCGCCTTTC ATCGATAGCC AGATTCTGGC GGCATTTCTG GGCAAGCCGC TGTCTTATGG TTTTGCTGCG TTGGTGGCGG ACTACCGGCA AGTGGCACTG GATAAAAGTG AATCCCGTAC CGACTGGCTG GCGCGTCCGC TGAGCGAAAA GCAATGTCAG TACGCGGCCG CGGATGTGTT TTACCTGCTG CCGGTAGCCA GAACGTTGGT CGCAGAGACG CGCGCCGCGG GTTGGCTGGA TGCGGCGCTG GATGAGTGCC GGTTATTGTG TCAGCGCCGT CAGGAGGTGT TGGCGCCGGA GATGGCGTAT CGGGAGATCG GTAATGCCTG GCAATTGAGA GGGCGCCATC TGGCCTGTTT GCAAAAACTG GCGGCATGGC GTTTGCGCAA AGCGCGTGAG CGCGATAGCG CCGTCAATTT TATTGTCCGT GAAGAGAACC TGTGGCAGGT CGCCCGTTGC CTGCCGGGTT CACTTGGGGA GCTTGATTCG CTAGGACTGA GCGGGCCGGA AATTCGTTAT CACGGTAAGA CGTTGCTGGC GCTGGTGGCG GAAAGCGCGT CGTTAAGCGA AGCGGATTAC CCGCCGGCGG TGGTCAATTT GATCGATTAT CCCGGCTATA AGAAAGCGTT TCGCGATATC AAAGCGTTGG TGCAGCAGAG TGCGGAACAG AGTGGCTTGT CGGCCGAGCT GTTGGCATCC CGGCGGCAAA TTAACCGCTT GCTGAACTGG CACTGGAAAT TGGTCGTGAC GGAATGCGAA CCCGAAATGA TCTCCGGGTG GCGTGGGCGT TTGTTCGGGC CTGGCTTGAA AACGATTCTG GCGGATTATT GA
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Protein sequence | MNYQLITTDE GLSAVCAQAC AVSEVALDTE FVRTRTYYPQ LGLIQLYDGD NLSLIDPLAI RDWAPFRALL QNPQITKFLH AGSEDLEVFL NAFGCLPSPF IDSQILAAFL GKPLSYGFAA LVADYRQVAL DKSESRTDWL ARPLSEKQCQ YAAADVFYLL PVARTLVAET RAAGWLDAAL DECRLLCQRR QEVLAPEMAY REIGNAWQLR GRHLACLQKL AAWRLRKARE RDSAVNFIVR EENLWQVARC LPGSLGELDS LGLSGPEIRY HGKTLLALVA ESASLSEADY PPAVVNLIDY PGYKKAFRDI KALVQQSAEQ SGLSAELLAS RRQINRLLNW HWKLVVTECE PEMISGWRGR LFGPGLKTIL ADY
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