Gene Dd1591_1990 details

Gene Information

• Locus tag: Dd1591_1990
• ID: 8119307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2273306
• End bp: 2275255
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644852380
• Product: helicase c2
• Protein accession: YP_003004318
• Protein GI: 251789597
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCAT TGTCAGACAA GAGAGACAGC GTGACGGCAG ACAGCGCAAT CGACGATTTC 
GCAACGGATG GCGTATTGGC TCAGGCGATT GAGGGCTTTC AGCCGCGTGA ACCACAACGC 
CAAATGGCCG CGGCCGTGCT GGCGGCGATT GATGCGCAAA AACCGTTGGT GGTAGAGGCG 
GGCACCGGCA CCGGGAAAAC CTATGCCTAT CTGGCGCCGG CGCTACGCTG CGGCAAAAAA 
GTGACCATTT CCACCGGTTC ACGTGCATTG CAGGATCAAC TGTACAGCCG TGATTTGCCG 
ACTGTGGCCA AGGCACTGAA TTTTCAGGGT AAACTGGCCT TGCTGAAAGG ACGCGCCAAT 
TATCTGTGCA TCGAGCGACT GGAACAGCAA TCGCTGGCGG GGGGCGATCT TGGCCGCGAC 
GTGCTGCGTG AACTGGTTCG CTTGCGTGGC TGGTCTGTCG AAACCGAAGA CGGCGACATC 
AGCCAGTGTG GCGATGTGGC TGAAGACAGC GCGGTATGGC CGCTGGTGAC CAGCACCAAC 
GATAACTGTC TTGGCAGCGA CTGCCCGAAC TACAAAGCGT GCTTTGTCGT GAAGGCGCGC 
CGAAGAGCGA TGGATGCCGA CGTAGTGGTG GTGAACCATC ATCTTTATCT GGCGGATATG 
GTGGTTAAGG AGAGTGGGTT CGCCGAGTTA ATCCCCGACA GTGATGTCGT GGTGTTTGAC 
GAAGCCCACC AGATTCCAGA TATCGCCAGC CAGTACTTTG GCCAGCAGCT CTCCAGCCGC 
CAACTGCTGG ATCTCGCTAA AGATATCGTG ATTGCTTATC GCACCGAAGT GCGGGATGCC 
AGCCAACTGC AGAAAAGCGC CGATCGTCTG AGCCAGAGCA CTCAGGATTT TCGGCTGGCG 
CTGGGTGACC CCGGGTTTCG CGGTAATTTA CGTGACATTG TCACTGATAA CATGCTGCAA 
CGCTCGCTGA CGCTGCTGGA TGACGCGCTG GAGCTGTGCT GTGATGTTGC TAAGCTGTCG 
CTGGGGCGCT CTGCGTTGCT GGATGCGGCG TTTGAACGCG CGACCCTCTA CCGGGCGCGG 
TTGAAGCGGC TGCGGGATGT GCAGCAACCC GGCTACAGTT ACTGGTATGA GTGCACCTCG 
CGTCATTTTG TGCTGGCGTT GACGCCGCTA TCGGTCGCGG ACCGTTTTCG TGAGGTGATG 
AAAGAGAAGC CGGCTTGTTG GGTTTTTACC TCGGCGACGC TGTCGGTCAA CGATCGGCTC 
ACGCATTTTA TCGAACGACT TGGGTTGGAT CAGGCCCGGA CATTGCTGCT GCCAAGCCCA 
TTTGATTATG CACGTCAGGC GCTGCTGTGT GTGCCGCGCT ATCTGCCGGA AACCAACCGG 
CCTGGTGCGG CCAGACAACT GGCCCGCCTG TTGCGGCCGC TGATCGAAGC CAATCAGGGA 
CGCTGCTTCA TGTTGTGTAC GTCGCACCAG ATGATGCGTG ATTTGGCTGT CGAGTTTCGA 
GCCTCGTTGA CGTTGCCGGT GTTGGTGCAG GGGGAAACCA GTAAGCCACA GTTGCTGGCG 
CAGTTTCTGG CGGCGGGGAA CGCGCTGCTG GTGGCGACCG GCAGTTTCTG GGAAGGCGTC 
GATGTGCGCG GTGATGCGTT ATCGTGCGTG ATTATCGACA AACTACCGTT TACCTCACCA 
GACGATCCGT TGCTGAAAGC GCGTATGGAA GATTGCCGGG TGCGCGGTGG CGAGCCATTC 
GATGAGGTGC AATTGCCCGA TGCGGTGATT ACCTTGAAGC AGGGCGTCGG CCGGTTGATT 
CGCGATGTGA CGGATCGCGG CGTACTGGTG ATCTGCGACA ATCGTCTGGT GACAAGACCC 
TATGGCGAGG TGTTTCTCTC CAGCTTGCCG CCTGCGCCAA GAACGCGGGA TTTGCAGCAC 
GCCATTGATT TTCTGACGCG CAAACCGTGA 

 

Protein sequence

MTALSDKRDS VTADSAIDDF ATDGVLAQAI EGFQPREPQR QMAAAVLAAI DAQKPLVVEA 
GTGTGKTYAY LAPALRCGKK VTISTGSRAL QDQLYSRDLP TVAKALNFQG KLALLKGRAN 
YLCIERLEQQ SLAGGDLGRD VLRELVRLRG WSVETEDGDI SQCGDVAEDS AVWPLVTSTN 
DNCLGSDCPN YKACFVVKAR RRAMDADVVV VNHHLYLADM VVKESGFAEL IPDSDVVVFD 
EAHQIPDIAS QYFGQQLSSR QLLDLAKDIV IAYRTEVRDA SQLQKSADRL SQSTQDFRLA 
LGDPGFRGNL RDIVTDNMLQ RSLTLLDDAL ELCCDVAKLS LGRSALLDAA FERATLYRAR 
LKRLRDVQQP GYSYWYECTS RHFVLALTPL SVADRFREVM KEKPACWVFT SATLSVNDRL 
THFIERLGLD QARTLLLPSP FDYARQALLC VPRYLPETNR PGAARQLARL LRPLIEANQG 
RCFMLCTSHQ MMRDLAVEFR ASLTLPVLVQ GETSKPQLLA QFLAAGNALL VATGSFWEGV 
DVRGDALSCV IIDKLPFTSP DDPLLKARME DCRVRGGEPF DEVQLPDAVI TLKQGVGRLI 
RDVTDRGVLV ICDNRLVTRP YGEVFLSSLP PAPRTRDLQH AIDFLTRKP