| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1969 |
|---|
| Symbol | |
|---|
| ID | 8119286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2251097 |
|---|
| End bp | 2251987 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644852359 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003004297 |
|---|
| Protein GI | 251789576 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA ACAGAATGCT GGGGTTAGCT TATATCTCTC CCTATATAAT AGGGTTGATA
GTTTTCACTG CTTTCCCCTT TCTTTCATCA TTTGTGCTCA GTTTTACTGA GTACGATTTA
ATGAGTCCCC CCACATTCAC CGGTCTGGAA AATTACCACC GGATGTTTAT GGAGGACGAT
CTTTTCTGGA AATCCATGGG AGTAACATTT GCTTATGTCT TTTTGACTAT CCCGCTGAAA
CTGATTTTTG CACTGCTTAT TGCGTTCGTG CTGAATTTCA AGTTACGCGG AATCGGTTTT
TTCCGTACCG CTTATTACGT ACCGTCGATT CTCGGCAGCA GCGTGGCTAT CGCCGTACTG
TGGCGCGCCT TGTTCGCCAT CGACGGGTTG CTGAACAGTT TTATCGGCGT CTTTGGTTTA
GATCCGGTCA ACTGGCTGGG TGAACCGTCG CTGGCGCTGA TGTCGGTTAC CTTACTGCGT
GTCTGGCAGT TCGGCTCCGC GATGGTGATC TTCCTGGCTG CCTTGCAAAA CGTACCGCAA
TCGCAGTATG AAGCGGCGAT GATCGATGGC GCATCGAAAT GGCAGATGTT CCTGAAAGTC
ACCGTACCGC TGATTACACC GGTTATTTTC TTCAACTTTA TTATGCAGAC GACGCAAGCG
TTTCAGGAAT TTACCGCGCC CTACGTCATT ACCGGTGGTG GCCCAACCCA CTACACCTAT
CTGTTCTCGC TCTATATCTA TGATACGGCC TTCAAGTATT TCGATATGGG GTACGGCGCG
GCCCTGGCAT GGGTGCTGTT CCTGGTGGTA GCCGTATTCG CCGCTATCTC CTTTAAATCG
TCTAAATACT GGGTGTTCTA TTCCGCCGAT AAAGGAGGAA AAAATGGCTG A
|
|---|
| Protein sequence | MNENRMLGLA YISPYIIGLI VFTAFPFLSS FVLSFTEYDL MSPPTFTGLE NYHRMFMEDD
LFWKSMGVTF AYVFLTIPLK LIFALLIAFV LNFKLRGIGF FRTAYYVPSI LGSSVAIAVL
WRALFAIDGL LNSFIGVFGL DPVNWLGEPS LALMSVTLLR VWQFGSAMVI FLAALQNVPQ
SQYEAAMIDG ASKWQMFLKV TVPLITPVIF FNFIMQTTQA FQEFTAPYVI TGGGPTHYTY
LFSLYIYDTA FKYFDMGYGA ALAWVLFLVV AVFAAISFKS SKYWVFYSAD KGGKNG
|
|---|
| |