| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1942 |
|---|
| Symbol | mnmA |
|---|
| ID | 8119419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2221825 |
|---|
| End bp | 2222943 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644852332 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_003004270 |
|---|
| Protein GI | 251789549 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.925496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGT CAGATAACAG CCAGAAAAAA GTGATTGTCG GTATGTCCGG CGGTGTTGAC
TCATCGGTTT CCGCCTACCT GCTGCAACAG CAAGGTTATC AGGTTGAAGG CCTGTTCATG
AAGAACTGGG AAGAGGATGA CGACACGGAG TACTGCTCTG CCGCCACTGA TTTGGCTGAT
GCGCAGGCGG TGTGCGACAA GTTGGGAATT GAACTGCATA CCGTCAATTT CGCGGCCGAA
TATTGGGACA ATGTTTTTGA ACATTTTCTG GCGGAATACC GCGCCGGCCG CACGCCCAAC
CCGGATATTC TGTGCAACAA GGAAATCAAA TTCAAAGCCT TCCTGGAGTT TGCGGCAGAA
GATTTGGGCG CGGATTACAT CGCGACCGGC CATTACGTAC GTCGTCATGA CATCGATGGA
AAAAGCCATC TGCTGCGCGG TCTGGACGGC AACAAAGACC AAAGTTATTT CCTCTATACA
CTGAGTCACC AGCAACTGGC CCAAAGCCTG TTCCCGGTCG GCGAATTGGA AAAACCACAG
GTGCGGAAAA TCGCCGAACA GCTCTCTCTG GCGACCGCCC GGAAAAAAGA CTCCACCGGT
ATCTGTTTCA TCGGCGAGCG CAAATTCCGC GACTTCCTGG CACGTTACCT GCCTGCACAA
CCCGGCCCAA TCTTGTCCGT CGACGATGGT AAAGTGATGG GCGAGCATCA GGGCCTGATG
TACCACACGT TGGGGCAACG CAAGGGGCTC GGCATCGGCG GCGTGAAAGA AGGCGGTGAC
GACCCGTGGT ATGTGGTTGA TAAAGACGTT GCCGGCAACG TGCTGTATGT CGCTCAGGGC
CATGAGCACC CACGCCTGAT GTCCGTCGGG TTGATCGCGC AGCAGTTACA CTGGGTCGAT
CGTGAGCCGC TGGCGGCACC ACTGCGTTGC ACCGTCAAAA CCCGCTATCG TCAGGCCGAT
ATTCCCTGTT TGCTGACGCC GCTGGACGCC GACCGCATTG AAGTTCGTTT TGACGAACCG
GTAGCGGCCG TCACGCCGGG CCAATCCGCC GTATTTTACC TGGGCGAAGT GTGCCTTGGC
GGCGGCATCA TTGAAGAACG CCTGCGCGCG GCGCAATAA
|
|---|
| Protein sequence | MSMSDNSQKK VIVGMSGGVD SSVSAYLLQQ QGYQVEGLFM KNWEEDDDTE YCSAATDLAD
AQAVCDKLGI ELHTVNFAAE YWDNVFEHFL AEYRAGRTPN PDILCNKEIK FKAFLEFAAE
DLGADYIATG HYVRRHDIDG KSHLLRGLDG NKDQSYFLYT LSHQQLAQSL FPVGELEKPQ
VRKIAEQLSL ATARKKDSTG ICFIGERKFR DFLARYLPAQ PGPILSVDDG KVMGEHQGLM
YHTLGQRKGL GIGGVKEGGD DPWYVVDKDV AGNVLYVAQG HEHPRLMSVG LIAQQLHWVD
REPLAAPLRC TVKTRYRQAD IPCLLTPLDA DRIEVRFDEP VAAVTPGQSA VFYLGEVCLG
GGIIEERLRA AQ
|
|---|
| |