Gene Dd1591_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1867 
Symbol 
ID8119344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2133719 
End bp2134984 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content60% 
IMG OID644852258 
Product4-aminobutyrate aminotransferase 
Protein accessionYP_003004196 
Protein GI251789475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID[TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACA GCGAATTGAA TCAACGTCGT TTGGCCGCCA CGCCGCGTGG TGTGGGCGTC 
ATGTGTGATT TTTTTGCCGA TAAGGCGGAG AACGCCACCC TGTGGGATGT CGAAGGGCGC
GAGTATACCG ATTTTGCCGC CGGGATTGCG GTGCTGAACA CCGGCCACCG TCACCCGAAA
TTGCTGGCGG CGGTGCGTGA ACAACTGGAG AAATTCACGC ACACGGCGTA TCAAATCGTC
CCGTACGGCA GTTATGTGAC GCTGGCGGAG CGCCTGAATG CGCTGGCGCC AATCGCCGGT
CCGGCTAAGA CGGCTTTCTT CACCACCGGG GCGGAAGCGG TTGAAAATGC GGTGAAAATC
GCCCGTGCCT ATACCAAACG CCCAGGCGTG ATCGCCTTTG GTTCCGCGTT CCACGGCCGC
ACGCTGTTAA CGCTGACGCT GACCGGTAAA GTGGCGCCGT ATTCCAACGG TTTTGGCCCG
TTCCCCGGCT CCATTTTCCA TGCACTGTAC CCGAATGCCC AGCACGGCAT CACCGTCGAG
CAGTCGCTGG AAAGCATTGA TCGCCTGCTG CATACCGATA TCGCTGCCGA TCAGGTCGCT
GCCATTCTGC TGGAGCCGAT TCAGGGCGAA GGCGGCTTCA ATGTCGCGCC GCCGGAATTT
ATCAGTGGAG TACGCCAGTT GTGTGACAAA TACGGCATGT TGTTGATCGC CGATGAAGTG
CAAACCGGTT TTGCCCGTAC CGGTAAAGTG TTTGCGATGG AGTATTACGA CGATAAAGCG
GATCTGATCA CCATGGCGAA GAGCCTGGGC GGCGGTTTCC CGATTTCCGG CGTGGTCGGC
CGCGCCGAGG TGATGGATGC GCCAGGCCCC GGCGGACTGG GCGGCACCTA TGCCGGTAAC
CCGCTGGCGG TGGCGTCGGC GTTGGCGGTG CTGGATGTGA TCGACGAAGA GCAACTGTGT
CTGCGCGCCC AGCGTCTTGG CGCTACACTG GTGGAAACGC TGGAGCAGGC GAAGGCCACG
AATCCGGCGA TCGTGGATAT CCGTGCCCGC GGCTCGATGG TGGCGGTGGA ATTCAATGAC
CCGCAGACCG GCAAACCGAG TGCGGATATC ACCAAAAAAT ACCAGCAGGC GGCGCTGGAA
CAGGGGCTGC TGCTGCTGAC CTGCGGTACG TATGGCAACG TGATCCGTTT TCTGTATCCG
CTGACCATTC CGGATGCCCA GTTCAGCAAG GCATTGTCGA TTCTGGCCCA GCTTCTGGCG
AAGTAA
 
Protein sequence
MSNSELNQRR LAATPRGVGV MCDFFADKAE NATLWDVEGR EYTDFAAGIA VLNTGHRHPK 
LLAAVREQLE KFTHTAYQIV PYGSYVTLAE RLNALAPIAG PAKTAFFTTG AEAVENAVKI
ARAYTKRPGV IAFGSAFHGR TLLTLTLTGK VAPYSNGFGP FPGSIFHALY PNAQHGITVE
QSLESIDRLL HTDIAADQVA AILLEPIQGE GGFNVAPPEF ISGVRQLCDK YGMLLIADEV
QTGFARTGKV FAMEYYDDKA DLITMAKSLG GGFPISGVVG RAEVMDAPGP GGLGGTYAGN
PLAVASALAV LDVIDEEQLC LRAQRLGATL VETLEQAKAT NPAIVDIRAR GSMVAVEFND
PQTGKPSADI TKKYQQAALE QGLLLLTCGT YGNVIRFLYP LTIPDAQFSK ALSILAQLLA
K