| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1844 |
|---|
| Symbol | |
|---|
| ID | 8117327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2105077 |
|---|
| End bp | 2105808 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644852236 |
|---|
| Product | putative solute/DNA competence effector |
|---|
| Protein accession | YP_003004174 |
|---|
| Protein GI | 251789453 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.790888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AACCTAAGTT GAACAGTAGT AAAGAAGTGA TCGCCTATCT GGCAGAGCGT
TTTCCGCTCT GTTTCACGCT TGAAGGCGAA GCGCGTCCGT TAAAGATTGG CATTTTTCAG
GATCTGGTCG AACGCGTGTC CGAATCCGAG CACGTCAGCA AGACGCAGTT GCGCTCCGCG
CTGCGTTTGT ATACGTCAAG CTGGCGTTAT CTGTATGGCG TCAAACTGGG CGCTCAACGC
GTCGATCTTG ACGGCAACCC GTGCGGCGAG CTCGAGCAGC AGCATGTGGA ACATGCGCGC
AAGCAACTGG AAGAGGCCAA AGCCCGTGTT CAGGCTCAGC GTGCAGAGCA GCAGGCGAAG
AAACGTGAGT CCGGCGAGGC CGAACCCTCT CGTCCGCGTC CTTCTGCCGG CAGAAATGCT
CCGCGCCGTG AGCGAGATGC CGCAGGTTCA GCTCCGCGTA AACCGCGTCC GTCTTCTTCC
CGTTCCGCAC AGACCGCTTC CCCGTCATCC GATAAATCCC AACCCCGTCA GCCGAAAGCA
GCCCGTACGG TGCAACCGGA ACGGCAGGCG GTGACGGATA TTTCCAGCCT GCAGATTGGC
CAGGAAATCA AAGTCAGGGC TGGCAAAAGC GCCATGGATG CCACTGTGCT TGAGATCGCC
AAAGATGGAG TCAGGGTTCA ACTGGCTTCC GGTCTGGCGA TGATCGTACG CGCAGAACAT
TTGCAGTTCT GA
|
|---|
| Protein sequence | MENQPKLNSS KEVIAYLAER FPLCFTLEGE ARPLKIGIFQ DLVERVSESE HVSKTQLRSA
LRLYTSSWRY LYGVKLGAQR VDLDGNPCGE LEQQHVEHAR KQLEEAKARV QAQRAEQQAK
KRESGEAEPS RPRPSAGRNA PRRERDAAGS APRKPRPSSS RSAQTASPSS DKSQPRQPKA
ARTVQPERQA VTDISSLQIG QEIKVRAGKS AMDATVLEIA KDGVRVQLAS GLAMIVRAEH
LQF
|
|---|
| |