Gene Dd1591_1681 details

Gene Information

• Locus tag: Dd1591_1681
• ID: 8117882
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1922549
• End bp: 1924498
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644852073
• Product: ABC transporter ATPase component
• Protein accession: YP_003004013
• Protein GI: 251789292
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAA TCAGTTTATC CGGCGCCTGG CTGTCATTCA GCGATGCGCC GCTGTTGGAC 
AACACCGAAC TGCATATTGA AGACAACGAG CGCGTGTGTC TGGTCGGGCG TAACGGCGCC 
GGCAAATCCA CCTTGCTGAA AATTCTGGCG AAGGAAATCC CGCTGGATGA CGGCCGATTG 
GTGTACGAAC AAGACCTGAT CGTAGCGCGT CTGCAACAGG ACCCGCCGCG CGATATCGAC 
GGCACGGTGT TTGATTTTGT GGCGGAAGGC GTGGCGGCGC AGGCCGAGTA CCTGAAAGCC 
TACCATGTCG CATTGCGGCT GGTGGGGGAA GACCCGAGTG AGAAGAACCT GAATCAACTG 
GCGAAGATTC AGGACGTGTT GGATCATCAG GGCTTGTGGA AGCTGGAAGA TCGCATCAGC 
GAGGTGCTGG CTCAACTGGG GTTGTCGGCG GATACGCCGC TGTCGGCGTT ATCCGGCGGC 
TGGCTGCGTA AAGCGGCGCT GGGGCGTGCG TTGGTCAGCG CGCCGCGGAT ATTGTTGCTG 
GATGAGCCGA CCAACCACCT GGATATCGAC ACCATCGACT GGCTGGAAGA TTTCCTTAAG 
GCGTTTTCCG GCAGCATTGT GTTTATTTCC CATGACCGGT CGTTTATCCG CAATATGGCG 
ACCCGCATTG TCGATCTGGA TCGCGGCAAG ATGGTGTCCT GGCCCGGCGA TTACGACAAG 
TATCTGCTGG GTAAAGAAGA AGCGCTGCGG GTGGAAGATC TGCAGAATGC TGAATTCGAC 
CGCAAGCTGG CGCAGGAAGA GGTGTGGATC CGTCAGGGCA TCAAAGCCCG TCGTACCCGT 
AACGAAGGCC GGGTGCGGGC GCTCAAGGCG ATGCGTCAGG AACGCGCCGA ACGCCGCGAA 
GTGATGGGCA GCGCCAAAAT GCAGGTGGAA GAGGCGGCAC GATCCGGCAA GGTCGTCTTT 
GAACTGGAAG ACGTGCATTA TCAGGTGGAT GACAAGACGC TGGTATCCGG CTTTTCCGCT 
CAGGTACAAC GCGGCGATAA AATCGCACTG GTTGGGCCGA ACGGTTGCGG CAAGACCACG 
CTGCTGAAAC TGATGCTGGG GCAACTGGCG CCGATATCCG GACGCATTCA CTGCGGCACC 
AAGCTGGAAG TGGCGTATTT CGATCAACAC CGTGCCGAAT TAGACCCGGA AAAAACGGTG 
ATGGATAACC TTGCCGAAGG CAAGCAGGAA GTGATGGTTA ACGGCCGTTC GCGCCATGTG 
CTGGGTTACC TGCAAGACTT TCTGTTTCAC CCGAAACGTG CCATGACGCC GGTTAAAGCG 
CTGTCCGGCG GGGAACGCAA CCGCCTGCTG CTGGCCCGAT TGTTCCTGAA ACCCAGTAAC 
CTGCTGATCC TCGACGAACC GACCAACGAT TTGGATGTGG AAACGCTGGA ACTGCTGGAA 
GAGTTGCTGG AAAGTTATCA GGGCACGGTG CTGCTGGTGA GCCATGATCG TCAGTTCGTC 
GATAACTCGG TCACCGAATG CTGGATTTTT GAAGGGCAGG GTCTGATTGG CCGCTATGTC 
GGCGGCTATT ATGATGCTCA GCAACAGCGT GCGTCCGCTG CGCCGTTGCG CACGTCCTTA 
CCAGTAAAAA GCGCACCAGT AAAAAGCGCC GCGGTGAAAG AAAACCGCGA CAATGAGAAG 
GTGCCGAGCG AGCCGGCCGC ACAGCCGGCT AAACGCGGCG GCGGCAAGCT CAGTTATAAC 
CAGCAGCGTG AACTGGAACA GTTGCCGCAG CGCATTGAAG CGCTTGAGAA CGAGATTGAA 
AATCTGCAAC AGCAGATGAA CGATCCGGCG TTTTTTTCCC GGTCGCATGA TGAAACCCAG 
CCGGTGCTGG CGGCGCTGGA GCAAGCGGAA CAGCAACTGG AAGCCTGTTT TGAACGCTGG 
GAGGCGCTTG AAGCGCAAAA GAACGGCTAA 

 

Protein sequence

MSLISLSGAW LSFSDAPLLD NTELHIEDNE RVCLVGRNGA GKSTLLKILA KEIPLDDGRL 
VYEQDLIVAR LQQDPPRDID GTVFDFVAEG VAAQAEYLKA YHVALRLVGE DPSEKNLNQL 
AKIQDVLDHQ GLWKLEDRIS EVLAQLGLSA DTPLSALSGG WLRKAALGRA LVSAPRILLL 
DEPTNHLDID TIDWLEDFLK AFSGSIVFIS HDRSFIRNMA TRIVDLDRGK MVSWPGDYDK 
YLLGKEEALR VEDLQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRQERAERRE 
VMGSAKMQVE EAARSGKVVF ELEDVHYQVD DKTLVSGFSA QVQRGDKIAL VGPNGCGKTT 
LLKLMLGQLA PISGRIHCGT KLEVAYFDQH RAELDPEKTV MDNLAEGKQE VMVNGRSRHV 
LGYLQDFLFH PKRAMTPVKA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE 
ELLESYQGTV LLVSHDRQFV DNSVTECWIF EGQGLIGRYV GGYYDAQQQR ASAAPLRTSL 
PVKSAPVKSA AVKENRDNEK VPSEPAAQPA KRGGGKLSYN QQRELEQLPQ RIEALENEIE 
NLQQQMNDPA FFSRSHDETQ PVLAALEQAE QQLEACFERW EALEAQKNG