Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1648 |
Symbol | |
ID | 8117849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1878462 |
End bp | 1879667 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852040 |
Product | outer membrane-specific lipoprotein transporter subunit LolC |
Protein accession | YP_003003980 |
Protein GI | 251789259 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAC CTGTCGCACT TTTTATTGGC CTGCGTTATA TGCGAGGGCG GGCCGCGGAC CGCTTTGGGC GGTTTGTTTC CTGGTTATCC GCTATTGGTA TCACCCTCGG CGTGATGGCG TTGGTTACCG TGCTGTCGGT AATGAACGGT TTTGAGCGGG AACTGGAAAA CAGCATTCTG GGGCTGATGC CTCAGGCCCT GATCACGACG CCGCAAGGCT CCCTTAATCC ACAGACGTTA CCGGCCTCTT CGCTCTCTGC GCTGAAGGGC GTGAACCGTA TCGCGCCGCT CACGACCGGC GATGTCGTGC TGCAAAGCGC CCGCAGCGTG GCGGTGGGGG TGATGCTCGG TATCAATCCG GACGAGCAGG AACCGCTGGC GAGTTATTTG ACCAAGGCGG CGTCGCTACA GCAACTGCAG CCGAGTCAAT ATCAGGTGAT TCTCGGTGAG CAACTGGCCA ACCAGCTCGG CGTCAAGCCG GGCGATCACG TGCGATTGAT GGTGACCGGC GCCAGCCAGT TGACGCCGAT GGGACGTGTG CCGAGCCAAC GGTTGTTTAC CGTCGCCGGG ACGTTTTACG CCCACAGCGA AGTGGATGGT TATCAACTGT TGGTTAACCA GCAGGATGCG TCGCGCCTGA TGCGCTATGC GCCCGGCAGC ATCACCGGCT GGCGGCTGTG GCTTGACCAA CCGCTGACGG TGGATACGCT GAGTCAGCAG GCGTTGCCGG CAGGGACGGC ATGGAAAGAC TGGCGTGAGC GCAAAGGCGA GTTGTTCCAG GCGGTCCGGA TGGAGAAAAA CATGATGGGG CTGTTATTGA GCCTGATTGT GGCTGTCGCC GCGTTCAATA TCATTACTTC ACTGGGTTTG CTGGTGATGG AAAAACAGGG CGAAGTCGCG ATTTTGCAGA CGCAAGGACT CACCCAGCGG CAGATCATGG CGGTCTTTAT GGTTCAGGGC GGCGGCGCCG GTGTGGTGGG GGCGTTGGTC GGCGCGATAC TGGGTATGGT GCTGGCCAGC CAGTTGAATA CCCTGATACC GATGCTGGGG TTGTTGATTG ACGGTGGCGC GCTGCCGGTA CAGATTCAGC CGTTGCAGGT GATCGCGATT GCGCTGGTGG CGATGCTGCT GGCGCTGCTT TCCACGCTTT ATCCTTCCTG GCGCGCGGCC GCCACCCATC CCGCAGAGGC TTTACGTTAT GAGTAA
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Protein sequence | MYQPVALFIG LRYMRGRAAD RFGRFVSWLS AIGITLGVMA LVTVLSVMNG FERELENSIL GLMPQALITT PQGSLNPQTL PASSLSALKG VNRIAPLTTG DVVLQSARSV AVGVMLGINP DEQEPLASYL TKAASLQQLQ PSQYQVILGE QLANQLGVKP GDHVRLMVTG ASQLTPMGRV PSQRLFTVAG TFYAHSEVDG YQLLVNQQDA SRLMRYAPGS ITGWRLWLDQ PLTVDTLSQQ ALPAGTAWKD WRERKGELFQ AVRMEKNMMG LLLSLIVAVA AFNIITSLGL LVMEKQGEVA ILQTQGLTQR QIMAVFMVQG GGAGVVGALV GAILGMVLAS QLNTLIPMLG LLIDGGALPV QIQPLQVIAI ALVAMLLALL STLYPSWRAA ATHPAEALRY E
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