Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1590 |
Symbol | fliA |
ID | 8118110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1810429 |
End bp | 1811151 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644851982 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_003003923 |
Protein GI | 251789202 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAAC TGTATACCGC TGAAGGCACA ATGGATAAAA ATTCATTATG GAAGCGCTAT GTTCCATTGG TGCGCCATGA AGCCTTACGC TTACAGGTTC GTCTCCCGGC GAGCGTTGAG CTCGATGACC TCCTGCAGGC GGGAGGCATT GGGCTACTCA GTGCGGTAGA GCGCTATGAT TCGTTGCAAG GTACGGCATT CACAACCTAT GCCGTGCAGC GTATTCGTGG CGCAATGCTG GATGAGTTGC GTAGCCGGGA TTGGGCGCCA CGCAGTGTCA GGCGTAACGC CCGGGAAGTA GCGCAGGCGA TGCAGCAGGC TGAACAGTCA CTCGGCAGGG CGCCTTCCGA ACAGGAGGTC GCCCAAACTC TGAATATCTC GCTGGAGGAA TATCGTCAGA TTTTGCTGGA TACCAACAAT AGCCAGCTGT TTTCTTACGA TGAATGGCGG GAAGAACATG GGGACAGTGC CGAGGCGTTG CTGGAAGGAA ACGAAGACGC TAATCCACTG AATCAGTTGA TGGATGTCAG TCTACGTCAA CGGGTAATGG ATGCGATTGA AAACCTGCCA GAGCGCGAAA AAATGGTGTT GACTCTCTAC TATCAGGAAG AGCTGAACCT GAAGGAAATT GGTGCAGTGC TGGAAGTAGG GGAGTCGCGC GTTAGTCAGT TGCATAGCCA GGCGATTAAG CGTCTGCGTG CGAAATTAAT GAGTGACGTT TAA
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Protein sequence | MSELYTAEGT MDKNSLWKRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLSAVERYD SLQGTAFTTY AVQRIRGAML DELRSRDWAP RSVRRNAREV AQAMQQAEQS LGRAPSEQEV AQTLNISLEE YRQILLDTNN SQLFSYDEWR EEHGDSAEAL LEGNEDANPL NQLMDVSLRQ RVMDAIENLP EREKMVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRAKLMSDV
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