Gene Dd1591_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1590 
SymbolfliA 
ID8118110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1810429 
End bp1811151 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content53% 
IMG OID644851982 
Productflagellar biosynthesis sigma factor 
Protein accessionYP_003003923 
Protein GI251789202 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAC TGTATACCGC TGAAGGCACA ATGGATAAAA ATTCATTATG GAAGCGCTAT 
GTTCCATTGG TGCGCCATGA AGCCTTACGC TTACAGGTTC GTCTCCCGGC GAGCGTTGAG
CTCGATGACC TCCTGCAGGC GGGAGGCATT GGGCTACTCA GTGCGGTAGA GCGCTATGAT
TCGTTGCAAG GTACGGCATT CACAACCTAT GCCGTGCAGC GTATTCGTGG CGCAATGCTG
GATGAGTTGC GTAGCCGGGA TTGGGCGCCA CGCAGTGTCA GGCGTAACGC CCGGGAAGTA
GCGCAGGCGA TGCAGCAGGC TGAACAGTCA CTCGGCAGGG CGCCTTCCGA ACAGGAGGTC
GCCCAAACTC TGAATATCTC GCTGGAGGAA TATCGTCAGA TTTTGCTGGA TACCAACAAT
AGCCAGCTGT TTTCTTACGA TGAATGGCGG GAAGAACATG GGGACAGTGC CGAGGCGTTG
CTGGAAGGAA ACGAAGACGC TAATCCACTG AATCAGTTGA TGGATGTCAG TCTACGTCAA
CGGGTAATGG ATGCGATTGA AAACCTGCCA GAGCGCGAAA AAATGGTGTT GACTCTCTAC
TATCAGGAAG AGCTGAACCT GAAGGAAATT GGTGCAGTGC TGGAAGTAGG GGAGTCGCGC
GTTAGTCAGT TGCATAGCCA GGCGATTAAG CGTCTGCGTG CGAAATTAAT GAGTGACGTT
TAA
 
Protein sequence
MSELYTAEGT MDKNSLWKRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLSAVERYD 
SLQGTAFTTY AVQRIRGAML DELRSRDWAP RSVRRNAREV AQAMQQAEQS LGRAPSEQEV
AQTLNISLEE YRQILLDTNN SQLFSYDEWR EEHGDSAEAL LEGNEDANPL NQLMDVSLRQ
RVMDAIENLP EREKMVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRAKLMSDV