Gene Dd1591_1519 details

Gene Information

• Locus tag: Dd1591_1519
• Symbol: uvrC
• ID: 8117396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1737401
• End bp: 1739233
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644851910
• Product: excinuclease ABC subunit C
• Protein accession: YP_003003854
• Protein GI: 251789133
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0983209
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGAAC GTTTTGATGC CCAGGCTTTT CTGAAGACCG TAACCAGTCA GCCTGGGGTT 
TACCGTATGT ACGATGCCAG TGACACGGTT ATCTACGTCG GTAAAGCTAA GGATCTGAAG 
AAACGCCTTT CCAGTTATTT TCGTGCCCAT GTTGCCAGCC GTAAAACAGA GGCTTTGGTG 
AAAAGTATTC GGCAGATCGA TGTAACGATC ACGCATACTG AAACCGAAGC CTTGTTGCTT 
GAGCACAACT ATATCAAACG TTATCAGCCG CGTTACAACG TGCTGCTGCG TGACGACAAA 
TCCTACCCGC TGATTTTCCT TAGTGGAGAT ACGCATCCTC GGTTATCGGT TCATCGCGGC 
GCTAAACATG CCAAAGGCGA ATACTTTGGC CCGTTTCCGA ACGGTAATGC CGTTCGTGAA 
ACGTTGATGC TGCTGCAGAA GTTATTCCCC ATCCGACAAT GCGAAAATAG CGTTTATCGC 
AATCGTTCGC GTCCATGTCT GCAATATCAG ATTGGCCGTT GTTTGGGGCC ATGCGTTAGC 
GGCTTGGTGA GCGAGGAAGA TTATCAGCAA CAGGTCGAAT ATGTGCGCCT TTTTCTATCA 
GGCAAGGATC AGCAAGTGTT GACCCGATTG GTCGAGCGAA TGGAGGCGGC AAGCCATGCG 
CTGAAGTTTG AAGACGCCGC CCGTATCCGT GATCAGATTC AGGCTGTTCG TCGCGTGACC 
GAAAAACAAT TTGTCTCTGG CGATGGTGAT GATCTTGACG TGATCGGTGT GGCATTCGAT 
GCGGGGATGG CATGTGTACA CGTGCTCTTT ATTCGTCAAG GACAGGTTTT GGGTAGCCGT 
AGCTATTTTC CCAAAGTGCC TGGCGGGACG GAGCTGGCGG AAGTGGTGCA GACATTTGTC 
GGTCAGTTCT ATTTGCAGGG GAGTGCTTCC CGCACCCTGC CATCGGACAT CCTGCTGGAT 
TTTTCGCTAC CGGAGTACCA ACTGCTGGCG GAATCGCTGA GCGAACAGGC GGGGCGAAAG 
ATTCAGATTC AAACCCGCCC ACGTGGTGAC CGCGCACGCT ATCTTAAACT CGCGCGCACC 
AATGCCCATA CGGCATTGGC AACGAAATTG TCTCAACAAT CAACGGTTCA GCAACGTTTG 
ACGGCACTGG CGTCCGTGCT TGAGATTGAA AAAATCAACC GGATGGAATG TTTCGATATC 
AGTCATACCA TGGGTGAGCA GACGGTTGCT TCCTGCGTTG TTTTTAATGC TGATGGGCCG 
CTGCGTTCAG AGTACCGCCG CTACAACATT ACCGGTATCA CGCCAGGTGA TGACTACGCG 
GCTATGAACC AAGTGCTTAG GCGCCGCTAT GGCAAGTCGA TTGATGAAAG CAAGATTCCA 
GATGTCATCG TGATTGATGG CGGTAAAGGT CAATTGGCGC AGGCCAAAGA GGTTTTTGCG 
TCGTTGCAGG TATCCTGGGA TAAGAATCGG CCTTTGCTGT TGGGCGTTGC GAAAGGCAGT 
GATCGCAAAG CCGGCCTGGA AACGTTGTTT TTTGAAGCGA CGGGCGAGGG TGTTGCTTTG 
CCTGCTGATT CACCCGCATT ACATGTGATT CAACATATTC GCGATGATTC CCATAACCAT 
GCTATCAGTG GTCACCGTAA ACAGCGTGCC AAAGTCAAAA GCACCAGTTC ACTGGAGACT 
ATTGAAGGGG TGGGGCCGAA ACGGCGCCAG ATGCTGTTGA AATACATGGG AGGGCTACAG 
CCGCTGATGA ATGCCAGTAT CGAAGATATC GCCCAAGTAC CGGGAATTTC GCATTCGTTG 
GCAGAAAAAA TCTTTCATGC ATTGAAACAC TAG 

 

Protein sequence

MTERFDAQAF LKTVTSQPGV YRMYDASDTV IYVGKAKDLK KRLSSYFRAH VASRKTEALV 
KSIRQIDVTI THTETEALLL EHNYIKRYQP RYNVLLRDDK SYPLIFLSGD THPRLSVHRG 
AKHAKGEYFG PFPNGNAVRE TLMLLQKLFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVS 
GLVSEEDYQQ QVEYVRLFLS GKDQQVLTRL VERMEAASHA LKFEDAARIR DQIQAVRRVT 
EKQFVSGDGD DLDVIGVAFD AGMACVHVLF IRQGQVLGSR SYFPKVPGGT ELAEVVQTFV 
GQFYLQGSAS RTLPSDILLD FSLPEYQLLA ESLSEQAGRK IQIQTRPRGD RARYLKLART 
NAHTALATKL SQQSTVQQRL TALASVLEIE KINRMECFDI SHTMGEQTVA SCVVFNADGP 
LRSEYRRYNI TGITPGDDYA AMNQVLRRRY GKSIDESKIP DVIVIDGGKG QLAQAKEVFA 
SLQVSWDKNR PLLLGVAKGS DRKAGLETLF FEATGEGVAL PADSPALHVI QHIRDDSHNH 
AISGHRKQRA KVKSTSSLET IEGVGPKRRQ MLLKYMGGLQ PLMNASIEDI AQVPGISHSL 
AEKIFHALKH