| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1504 |
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| Symbol | |
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| ID | 8117379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1720854 |
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| End bp | 1725227 |
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| Gene Length | 4374 bp |
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| Protein Length | 1457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644851895 |
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| Product | YD repeat protein |
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| Protein accession | YP_003003841 |
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| Protein GI | 251789120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACG ATATTCTGAG CCGGGTGGCC CGGGTAGGGG CCATGCATGC CGGAAACCGT
CCCAACCCGC CCGCCGACCG GCCGCAACCC TGTCAGGGTA AACCGCCAAC GTCGCCGGGC
AAGACCATCA AGCACAAGAG CTTCCTGGGT GCACTGGCGG GTGCCGTGGC CGGGGCGCTG
GTGGCGGCCG CCGTATTTAC CGCCGCTGCG GCCGTGGCGG GTGCTATCGC CGTTGCGGCG
ATTGGCACGG GTGGAATGGG GGCGGCGCTG GTGGTGGGGG TGGTAAAACT GGCCGCCGGA
TTTGGTGCGG TCAGCCTGCT GGGTGGGCTG ATAGACGCGG TGTCCAGCAA GGTGTCGGCG
ATGGTGGACA GCGGCTCGCC ATCGTTCGGA CCGGTGATGG CGGGCTCGGG TAACGTGTTT
GTCGAAAAAC AGCCGGTGGC CCGCGCCACG AAAGATACCG TCGCCTGCAC CCGGCACAAC
AGCCCGCAAC TGATTGCCCA GGGCAGCGAG TCGGTATTTG TGAACGACGC GCCAGCGGCC
CGTATCGACG ATAAAACCGT GTGTGGTGCC ACTATCAAGG AAGGGGCCTC GACGGTATTT
TTCGGCTCCG GGCAGGGCAC CTATCTGGAG ATTGCCGAAG AGTTTACCGC GCTGCAACGC
GCGCTGCTGA TTGCGGTGGA GTTTCTGGTG CCACCCAGCC GCGGCATGTT CAAAGGGCTG
GGGAAACTGT TCACCCGTGG GCCGATGTGG GTTCTAAAAG GGATGCGTGT CGGGGCGCTG
AAAACGCTAA AAGGACTGAA AAGCGCCGTT AAATGTGCCA GTGAGGGGTT TCGCAACAAC
AAGGGATTGT CGCGTGTCAC GGAAGCGGTG CGCGGTTTCC TCAAAGACCC GGTTTATATC
GCCAGCGGCG AGGTGATTGA ATCCCGTACC GATATCGCGC TGGGCCAGAC GCTGCCGCTG
GTGTTCGAAC GCACCTACCG CTCTGCCTCG GTACACACCG GGCTGCTGGG CCGCGGCTGG
CACGACAGTT GGAGCGAGGT GGCGACGGTA ACGCGCGACG GCCTCAACAC CCACGTGGTC
ATCACGCTGG CACAGGGCTA CGACATCGAT TTTACCTTCC ATCAGGACGT ACAGGCGGTG
TACTGCCCAC ACTACCCTGA ATTTACCCTG CACCGCCGGG GCGACGGCTT CAGCCTGTGG
CACCGCGACC AGCAGACCTG GCGCGACTTT AGCGTGGTGC AGGGCGAGCG CCGGTTGCTG
TCGGCCATTC ACGATAGCCA CGACAACCGC ATCGAGCTGG TGCGCGACCC GAAAGGCTAC
CTGCGCCAGG TGCGCCACAG CGACGGCGTC ACCCTGCTGC TGGTGTGGCG GGGCGAATTC
CTGCACCAGA TACAACGTAT CGATGGCGGC CAGAAGACGT TGCTGGCCGG GTACCGCCAG
GACGAACAGG GCCGACTGGT GGAAGCGGAC GCCACCCACG CCTATCACCT CTATTACGAG
TACGACGCGG CCCATCGGCT GACCCGCTGG CACGATAACG ACCAGACCTG GGCGCGCTAC
GAATACGACG CACAGGGGCG CTGCGTCTAC ACCACCTGCG CCGACGGTTT TCTGACCGCC
CGCTTCGACT ACCTGCCCGA CCGGGTGGTG ATGACCGACG GCCTCGGCCA GCGCAGCGAA
TTCGGCTTTA ACGACCTGCA CCTGATGAGC TGGGAACAAT CCCCGCTCGG CCACGTCACC
CGCTACGAGT ACGACGAGGT TGGCAACCTG CTGCGGGAAA TCTCGCCCGC CGGGCGGGTG
GTCGAATTCG GCTATCTGGA CGATACCGGG CGGGTCAGCA CCTTTACCGA CGCCAGCGGC
CACCAGTGGC AGTACGCCTA CGACGACGAG CAGCGGCTGT GCGGCGTCAC CGACCCGCTG
GGCCGCGAGT GGGGCTGGGC GTATGACGCC GAGGGTAACC CGGAACGGCT GACCGGCCCG
GATGCCAGCG AGGTCCGATT CACCTGGAAC CGCTATGGCC TGCTGACCCA GGTCAGCGAC
GCCGCCGGTG AGGTGCAGGC GCGGTTACAG TACGACCACC GTCAGCGGCT GCTGAGTGCC
ACCGACGCCG AGAGCCGCAC CCGGCAGTTA CGCTACGACG GGCAGGACCG GGTGGTGCAG
TGGCAACGGG CGGACGGTGC CCGTTTCCGG CTCGGCTACC GCCGGGCCAG CTGGACGCTG
CCGGAGCAGC TGATACGCCC GGATGACAAG GAAGAGCAGC GCCAGTACGA CCGCCACAAC
AACCTGCTGA GCTACGTGGA CGGCAACGGC GCGCTGTGGC GTCAGACCTT CGGGCCGTTC
GACCTGCTGA CCGCGCGCAC CGACGCCGAA GGCCGCACCT GGCACTACGC GTACGATAAA
GAGAGCCAGC AACTGACGAC GGTTATTGCC CCGGACGGCA GCCGCTGGCA GTGGTGGCTG
GACGCCGACG GGCGGGTCGT CCGCGAGCGT GACATGACCG GCACCGAGAC CCACTACGGC
TACGACGAGG ACGGCCTGTG CGTCAGCGTG CGCAACGGCG AAGGCGACAC CCGCCACTTC
CTCTACGACG CCCGCGGGCT GCTGTTGCGT GAAACCGCGC CGGACGACAC CCTGCACTAC
CGGTACGATG CGGTGGGCCG CCTGACCGAG GTCTCGTCGG CCACCGCCCA TGTGCAGCTG
GACTACGACC TGCGCGACCG GGTGGTGCGT GAATGGCACA ACGGCACGCT GCTCACCCGC
CAGGTTGATG ACGCGGCCCG CACCGTCACC CGCACCCTGA CCTGGGACGG CGATGCGGAC
GACACGACAA ACACCCTCGC GCCACTCACC AGTCTGTTCC ATTACACCCG CACCGGCGAG
CTGCGGCAGG TGCAGTTGCC GGACGGTGCC GACCTGACCC TGACCCAGGA CGCGGCAGGC
CGGGAGTCGC TCCGCACCGG CGGCAGCGGC TTTGTCCAGC AGCGGGAATA CGACGTGATG
GGCTGGCTGA CGCGGGAGAT GAGCGGCGCG CAACACGACG GCCACCTGCA ACCAGCGCAG
ACGCGGGAAT ACCGCTACGA CGGTGCCGGT AACCTGACCG GGGTGCGTCA CAACCGCGAC
GCCGAAGGTT ATCGTCTGGA CGCCACCGGC CGGGTGCAGG CAGTGCTGAG CGGCGGGGCG
GGCAAACCGG TGGACACCAC TGCCCGTTAC CACTACACCC GCAGCGGTCT GCCGCAGGAG
GCAGGCCGCC TTACCGAGTG GCAGGCCGGC AGACTGGTGC AGCACGATGA CACCCACTAC
CAGTACGACA GGGCCGGACG GCTTATCCGT AAACAGGTAC TCCAGCCGGG CTACCGCCCG
CAGGTGTGGC AGTACCGCTG GGACAGTCGC AACCAGCTGC GGGTGGTGGA TACCCCGACC
GGCGAACGCT GGCTGTACCG CTACGACCCG TTCGGCCGCC GGGTGGGCAA ACGCTGCGAC
CAGAAAGCCG AAGAGACCCG CTACCTGTGG GACGGCGACC AGATAGCGGA AATCCGCCAC
TACCGCCACG GCCAGCTGAT ACAGCGCCGC CACTGGGTGT ACAACGGCTG GGAGCTGGTG
GTACAGCAGC GCCAGCACAC CGGCGGCGAC TGGGAAACGG ATTTTGTGAC CAGCAGCCAG
AACGGCGTGC CGCAGGCGCT GTTCACACCG GACGGCACCC TGCGCTGGCA GGCCCCGACA
GCCACGCTGT GGGGCCAGCG GCAGGCAGAA AAATCGGAAA GTCCGGACCC CGGTCTGGCC
TTCGCCGGGC AGCTCCGTGA CAGCGAAAGT GGGTTGTGCT ATAACCGCTT TCGGTACTAC
GACCCGGCTG GCGGGTGTTA TGTCTCGCCA GACCCACTGA GCATCCTGGG TGGTGAGCAG
AACTATGCGT ATGTGCCGAA TCCGGTTGGA TGGGTTGATC CGCTGGGGTT AGCTCGCTGT
AATGGGTTGC CCTCAACTCG TAAACCGGGT GGTACTGGGG CGAGTTATGA TTCTATAAAT
GGGCAGGGGT TGTATATTTT ACATGAAGGA GGGAAAATAA AATATGTAGG TCGCGGAGAT
GCACCTTCGA GATTGGATAT TCATGCTCAA ACCCCTGGTA AGTCACACCT AGAGCAATTA
ATCATTTTTG ATAACAATCT GACAAAAGCA GAGGCGAAGT TTTTAGAAGA AAAATTAATA
GGTATGCATG GTGGCGCAAA ATCTATGAAT TCATTGACTA ACCTACTAAA TAAAATTCGA
TCATATAGTC CATCTAATCC TAATGCAGCA AACTATAAAG TTGCTGGTGA TAATTCATTA
TGGGGAAATG AAATATTAAA GGATGCGCTA TCTATAATAA GGGGGAATAC ATGA
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| Protein sequence | MLNDILSRVA RVGAMHAGNR PNPPADRPQP CQGKPPTSPG KTIKHKSFLG ALAGAVAGAL
VAAAVFTAAA AVAGAIAVAA IGTGGMGAAL VVGVVKLAAG FGAVSLLGGL IDAVSSKVSA
MVDSGSPSFG PVMAGSGNVF VEKQPVARAT KDTVACTRHN SPQLIAQGSE SVFVNDAPAA
RIDDKTVCGA TIKEGASTVF FGSGQGTYLE IAEEFTALQR ALLIAVEFLV PPSRGMFKGL
GKLFTRGPMW VLKGMRVGAL KTLKGLKSAV KCASEGFRNN KGLSRVTEAV RGFLKDPVYI
ASGEVIESRT DIALGQTLPL VFERTYRSAS VHTGLLGRGW HDSWSEVATV TRDGLNTHVV
ITLAQGYDID FTFHQDVQAV YCPHYPEFTL HRRGDGFSLW HRDQQTWRDF SVVQGERRLL
SAIHDSHDNR IELVRDPKGY LRQVRHSDGV TLLLVWRGEF LHQIQRIDGG QKTLLAGYRQ
DEQGRLVEAD ATHAYHLYYE YDAAHRLTRW HDNDQTWARY EYDAQGRCVY TTCADGFLTA
RFDYLPDRVV MTDGLGQRSE FGFNDLHLMS WEQSPLGHVT RYEYDEVGNL LREISPAGRV
VEFGYLDDTG RVSTFTDASG HQWQYAYDDE QRLCGVTDPL GREWGWAYDA EGNPERLTGP
DASEVRFTWN RYGLLTQVSD AAGEVQARLQ YDHRQRLLSA TDAESRTRQL RYDGQDRVVQ
WQRADGARFR LGYRRASWTL PEQLIRPDDK EEQRQYDRHN NLLSYVDGNG ALWRQTFGPF
DLLTARTDAE GRTWHYAYDK ESQQLTTVIA PDGSRWQWWL DADGRVVRER DMTGTETHYG
YDEDGLCVSV RNGEGDTRHF LYDARGLLLR ETAPDDTLHY RYDAVGRLTE VSSATAHVQL
DYDLRDRVVR EWHNGTLLTR QVDDAARTVT RTLTWDGDAD DTTNTLAPLT SLFHYTRTGE
LRQVQLPDGA DLTLTQDAAG RESLRTGGSG FVQQREYDVM GWLTREMSGA QHDGHLQPAQ
TREYRYDGAG NLTGVRHNRD AEGYRLDATG RVQAVLSGGA GKPVDTTARY HYTRSGLPQE
AGRLTEWQAG RLVQHDDTHY QYDRAGRLIR KQVLQPGYRP QVWQYRWDSR NQLRVVDTPT
GERWLYRYDP FGRRVGKRCD QKAEETRYLW DGDQIAEIRH YRHGQLIQRR HWVYNGWELV
VQQRQHTGGD WETDFVTSSQ NGVPQALFTP DGTLRWQAPT ATLWGQRQAE KSESPDPGLA
FAGQLRDSES GLCYNRFRYY DPAGGCYVSP DPLSILGGEQ NYAYVPNPVG WVDPLGLARC
NGLPSTRKPG GTGASYDSIN GQGLYILHEG GKIKYVGRGD APSRLDIHAQ TPGKSHLEQL
IIFDNNLTKA EAKFLEEKLI GMHGGAKSMN SLTNLLNKIR SYSPSNPNAA NYKVAGDNSL
WGNEILKDAL SIIRGNT
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