| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1487 |
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| Symbol | |
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| ID | 8117362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1705041 |
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| End bp | 1707788 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644851878 |
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| Product | CagE TrbE VirB component of type IV transporter system |
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| Protein accession | YP_003003824 |
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| Protein GI | 251789103 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC TGAATAAAGC GCTCACCCGG CCCGCCGCCA TTATGGGCAT CCCCATCGTC
CCATTCGTTC TCGTCAGCGG GGCCATCGTC CTGCTGTCGG TCTATGTCAG CTATTACCTG
ACGCTATTAC TGATCCCGGC CTGGCTGGAA ATGCGGGCGA AGGCCCGAGC CGATATCCAT
TATTTCGGGT TGTTATGGCT GGCGTTTAAA ACCCGTGGCC GGTTTGGCAC GAACCGGCAT
TTTGGCGCGA CGGCGATGCT GGCAAACCAG TATGACGCCG TCGATATTTC GGAGTTTACC
GACAAGATGA AATTAAACGC GCGCATCACG CTGGATAAAT ACATCCCCTA CTCTTCCCAC
CTTCACCCGC ACGTCATCAG AAACCGCCAC GGTGATTTCG TCGCCTCCTG GGAGCTGGGC
GGCACCCTGT TTGAATGTGA GGATGAACAT CATCTGACGC TGATGACAAG CCATCTCAAC
AACCTGATCC GCGCCTATGA AGGGCTGCCG GTCACGTTCT ATATTCACCG AATACGGGAG
ACCTATCAGG ATGCCTTTGA GGCGACCTCG GGTATTCCGT TTTCCGACGA AGTCGCGGCA
CGCTATTACC GGGCACTCAA CGCGAAGCCG CTCTGGCGGC ATCGGCTGTT TTTCACCGTC
TGTTATGCGC CCTTCTCCGC ACTGGAGAAA AAGGCCATGA AGACACAGCC CGCCGGAAAA
AGGCAGGCGG CGCTGGATGA AGCGCTGAAG GTCATGCTGG AGTACCATGC CGCACTCGGC
AGCGCACTGT CACGCTATAT GGCGACCCCT CTGGGAACCT ATGAGGAGAA AGGACGGGTC
TACTCCTCGC AACTGGCGTT CTACCATCGC CTGATCACCG GCCAATGGCA GCCGGTGGCG
GTGACACGCT CACCGTTTTA CCTCACGCTC AGTACACCGG ATGTGTTTTT TACCACCGAT
ACCGCCGAAT GCCAGACCGT CGGCGGCTCC CGGTTCTTCC GCAGTCTGGA AATTAAGGAC
TATTCACCGG AGACCGCGAC CGGCCTGCTG GATGCGCTGT TGTATGCCGA AAGCGAGTAC
GTACTGACGC AGTCTTTCAC CTGCATGGCA CGGGATGAGG CACAACACCA TATCCGGCTG
GCGGAAAAAC GGCTGAATGC AACCGACGAT GACGCACTGT CACAGCGTGA AGAGCTGGTT
GTCTTGCGCG ATCTGCTCCA GTCCGGGCAT GTGTCCTGCG GCAAATACCA TTTTTCCCTG
CTGGTGTCCT CGGCCAGTGC CGATCAGGTG GTCAGGGAGA CCCACGCGCT GGCCCAGCCG
TTTACCGACC TCGGTATCAT GACCTCGCTG TCCACGCTGT CGTTACCTGC CGCCTATCTG
GCTCAACTGC CCGGCATGTA TCCCTTTCGC CCCCGGCTGG TGGTCGTCAG CAGCCAGAAC
TACGCGGATC TGGGTAGCCT GCATAACTTT CACCCTCACA AGCGCAGCGG CAATCCGTGG
GGCGACGCCA TCGCCATTCT GACATCGCCC GGCGGCGGAG GTTATTACCT GAACCTGCAC
GACAGCCAGG TCGGGCGGGA TGACTTCAAC GAGAAAACAC CGGGGAATAC CGCCATCATC
GGCAAAACCG GCTCAGGGAA GACCCTGCTG ATGACGATGA TGCAACACCT GATGCAGAAG
TACCGCCACC CGGCGACATT TTCCGCTGCG GCCCCCGGTA AACGGCTGAC TACCGTTTAC
TTTGATAAAG ACCGGGCCGC CGAGATGTCG ATCCGCCAGA TGGGCGGGCG TTACTTTCGC
ATCCGCACCG GTACGCCTGC CGGGTTCAAC CCGTTCTCCC TTGCACCAAC CCGACGCAAC
ATCAGCTTTA TCAAGCAATT GGTCCGCATG TTGTGCCGTC GCAACGGCAA ACCGCTCGAC
CCACGCGATG AAGCGCGCAT CAGCGCCGCC GTGGATACCC TGATGCAGGA CTACCCGCCG
GAATTGCGCC GTTATGGCAT TACCCGGCTG CTGGAGGTGT TGCCCGAGCC GCCGACCCGC
GAGGCCAGAA CCAACGGGCT GCGCATCCGT CTGAAACAGT GGGCGCAGGG CGGCGAATTC
GGCTGGATTT TCGATAACGC GGAAGACAGC TTTAACATCG GCGAGAGCGA TAACATCGGC
ATCGATGGAA CAGAATTTCT GGATGACGAC GACATTCGCG GCCCGATCAC CTTTTACCTG
CTGTTCCGCG TCACCAGCCT GCTGGACGGT CGCCGGTTGG TGATGTTCAT GGATGAATTC
TGGAAATGGC TGGCTGATGT CGAGTTTTCC AGATTCTCCC TCAATATGCT CAAGGTGATC
CGCAAACTGA ACGGCATTTT TATCCCCGCC ACCCAGTCCC CCGATGAAAT TGTCAGGCAC
CCCATCGCGC CCGCGATTAT TGAACAGTGC AGCACACAGA TCTTTCTCGC CAATCCCAAA
GCCAGCCGGG CGGATTACGT AGAGAAAATG AACGTCCCCG ACAGCGTGTA TGACACCGTT
CGTCGTCTGG ACCCGGGAGA GCATTATATG GTCATCATGA AAACACCGCT GCGCGCCGGT
GAAACCCGGC CCTTTGTCGC CCTGGCAAGA ATGGATTTAT CGGGCATCGG CAATCTCACC
ACAATCCTGA GCGGAAGCGA AGACAACCTG AAACGGTTTG ATGCGCTTTA TCAGGAGGGC
ATGTCCCCTC AGGACTGGAA AGCGGCCTTC CTTGAACAGG CCATCTGA
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| Protein sequence | MTTLNKALTR PAAIMGIPIV PFVLVSGAIV LLSVYVSYYL TLLLIPAWLE MRAKARADIH
YFGLLWLAFK TRGRFGTNRH FGATAMLANQ YDAVDISEFT DKMKLNARIT LDKYIPYSSH
LHPHVIRNRH GDFVASWELG GTLFECEDEH HLTLMTSHLN NLIRAYEGLP VTFYIHRIRE
TYQDAFEATS GIPFSDEVAA RYYRALNAKP LWRHRLFFTV CYAPFSALEK KAMKTQPAGK
RQAALDEALK VMLEYHAALG SALSRYMATP LGTYEEKGRV YSSQLAFYHR LITGQWQPVA
VTRSPFYLTL STPDVFFTTD TAECQTVGGS RFFRSLEIKD YSPETATGLL DALLYAESEY
VLTQSFTCMA RDEAQHHIRL AEKRLNATDD DALSQREELV VLRDLLQSGH VSCGKYHFSL
LVSSASADQV VRETHALAQP FTDLGIMTSL STLSLPAAYL AQLPGMYPFR PRLVVVSSQN
YADLGSLHNF HPHKRSGNPW GDAIAILTSP GGGGYYLNLH DSQVGRDDFN EKTPGNTAII
GKTGSGKTLL MTMMQHLMQK YRHPATFSAA APGKRLTTVY FDKDRAAEMS IRQMGGRYFR
IRTGTPAGFN PFSLAPTRRN ISFIKQLVRM LCRRNGKPLD PRDEARISAA VDTLMQDYPP
ELRRYGITRL LEVLPEPPTR EARTNGLRIR LKQWAQGGEF GWIFDNAEDS FNIGESDNIG
IDGTEFLDDD DIRGPITFYL LFRVTSLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI
RKLNGIFIPA TQSPDEIVRH PIAPAIIEQC STQIFLANPK ASRADYVEKM NVPDSVYDTV
RRLDPGEHYM VIMKTPLRAG ETRPFVALAR MDLSGIGNLT TILSGSEDNL KRFDALYQEG
MSPQDWKAAF LEQAI
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