| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1405 |
|---|
| Symbol | |
|---|
| ID | 8120447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1596142 |
|---|
| End bp | 1597740 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851800 |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_003003746 |
|---|
| Protein GI | 251789025 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0707014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGTG GCCCCGCAGG CAGCAAGTTT TTCGTTTTCT TTAATTTAGG GACACAAAAC
GCCATGCTAC TACCTTGGCT GATTCTTATC CCCTTCATCG GCGGCCTGCT GTGCTGGCAG
CTCGAGCGTT TCGGCACGCG TGTGCCGCGC TGGGTCGCGC TGATCTCCAT GGGGCTGACA
CTGGCGCTGT CATTGCAGTT GTGGCTGCAA GGCGGCTTTT CGCTGGCGAC ACCGACGGGC
CTGCCGCAAT GGCAGTCGGA GTTTATGCTG AGCTGGATAC CGCGTTTCGG TATCTCCATT
CATCTGGCGC TGGATGGTTT GTCATTACTG ATGGTGGTGC TGACCGGCCT GCTGGGTGTG
CTGGCGATCC TCTGTTCCTG GCGTGAGATT CAACGCTATC AGGGGTTCTT CCATCTCAAC
CTGCTGTGGA TTCTCGGCGG TGTGATTGGC GTCTTCCTGG CCATCGACAT GTTCCTGTTC
TTCTTCTTCT GGGAAATGAT GTTGGTGCCG ATGTACTTCC TGATTGCGCT GTGGGGACAC
AAAGGCTCTG ATGGTAAGAC GCGTATCGCC GCTGCCACCA AATTCTTTAT TTATACCCAG
GCGAGCGGTC TGGTGATGCT GATTGCCATT CTGGCGTTGG TGTTCGTCCA TCACAATGCT
ACCGGTGAAT GGACCTTTGA TTATTCCCGC CTGCTGAAAA CCCCGATGTC TTACGGGCTG
GAATATGCAT TGATGCTGGG CTTCTTCATC GCTTTTGCGG TGAAAATGCC GGTGGTGCCG
TTGCATGGCT GGTTGCCGGA TGCACACAGT CAGGCGCCGA CCGCCGGTTC GGTGGATTTG
GCGGGGATCC TGCTGAAAAC GGCGGCCTAC GGTTTATTAA GATTCAGTTT GCCGCTGTTC
CCGACCGCCT CTCACGATTT TGCGCCTATA GCCATGTGGC TGGGCATTAT CGGTATTTTC
TACGGCGCCT GGATGGCCTT CAAACAGACC GACATCAAGC GCCTTATCGC GTATACCTCG
GTGTCTCACA TGGGCTTTGT GATGATTGCC ATCTACTCCG GCAGTCAACT GGCTTATCAG
GGCGCGGTGA TACAGATGAT TGCTCATGGT CTGTCGGCGG CAGGTCTGTT CATTATCTGT
GGTCAGATGT ATGAACGCCT GCACACCCGC GATCTGCGCC AGATGGGTGG CTTGTGGGGC
CGTATTCGTT ATTTGCCGGC GTTGTCGCTG TTTTTCGCAG TAGCCACGTT GGGGATGCCG
GGGACGGGTA ACTTTGTCGG CGAATTCATG ATCCTGTTCG GCAGTTACCC GGTGGTGCCG
GTGATCACGG TGATTTCGAC TTTCGGCCTG GTGTTTGCCT CCGTCTATTC GCTGGTGATG
ATGCAGCGTG CCTTCTACGG CGCCGCTAAG TCGGATGAGC CGCTGCAAGG TATGACGGCG
CGTGAACTGT CACTCATTCT GCTGCTGGTG GTACTGCTGG TGCTGCTGGG TGTGTATCCG
CAGCCGATTC TGGATACGTC CAGCGCGGCG ATGGCTAATA TCCAACACTG GTTTACGTCA
TCGGTTCAGA GTTCAACAAT TTCAACGACA GGGCTGTAA
|
|---|
| Protein sequence | MLSGPAGSKF FVFFNLGTQN AMLLPWLILI PFIGGLLCWQ LERFGTRVPR WVALISMGLT
LALSLQLWLQ GGFSLATPTG LPQWQSEFML SWIPRFGISI HLALDGLSLL MVVLTGLLGV
LAILCSWREI QRYQGFFHLN LLWILGGVIG VFLAIDMFLF FFFWEMMLVP MYFLIALWGH
KGSDGKTRIA AATKFFIYTQ ASGLVMLIAI LALVFVHHNA TGEWTFDYSR LLKTPMSYGL
EYALMLGFFI AFAVKMPVVP LHGWLPDAHS QAPTAGSVDL AGILLKTAAY GLLRFSLPLF
PTASHDFAPI AMWLGIIGIF YGAWMAFKQT DIKRLIAYTS VSHMGFVMIA IYSGSQLAYQ
GAVIQMIAHG LSAAGLFIIC GQMYERLHTR DLRQMGGLWG RIRYLPALSL FFAVATLGMP
GTGNFVGEFM ILFGSYPVVP VITVISTFGL VFASVYSLVM MQRAFYGAAK SDEPLQGMTA
RELSLILLLV VLLVLLGVYP QPILDTSSAA MANIQHWFTS SVQSSTISTT GL
|
|---|
| |