Gene Dd1591_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1398 
Symbol 
ID8120440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1587680 
End bp1589029 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content55% 
IMG OID644851793 
ProductNADH dehydrogenase I subunit F 
Protein accessionYP_003003739 
Protein GI251789018 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.940574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA ACATTGTTCT GACGGCTGAG CAGCATCCTT TAACCTGGCG CCTGCGTGCG 
GATAAACAGC CGGTGTGGCT GGAAGAATAC CGTAGTAAGA ATGGTTATGC CGGTGCGAAA
AAAGCACTGA CCGGTATGGC GCAGGATGAA GTGGTGACTC TGGTTAAAGA TGCCGGTTTG
CGTGGTCGCG GCGGTGCAGG TTTCTCCACG GGTCTCAAGT GGAGCCTGAT GCCGAAAGAC
GAAAGCATGA ACATCCGCTA TCTGCTGTGT AACGCGGATG AGATGGAGCC AGGCACTTAC
AAAGACCGAC TGTTGATGGA GCAGATGCCG CATCTGCTGG TGGAAGGCAT GTTGATCGGC
GCTTATGCGC TGAAAGCCTA TCGCGGTTAT ATCTTCCTGC GCGGCGAATA CGTTGAAGCC
GCGGCTAATT TGCGTCGTGC TATCGCTGAA GCGACAGAAG CGGGACTGCT CGGCAAAAAT
ATCATGGGCA CCGGCTTTGA TTTCGAGCTG TTTGTCCATA CCGGTGCCGG TCGTTACATT
TGCGGTGAAG AAACGGCACT GATCAACTCA CTGGAAGGTC GTCGCGCCAA CCCGCGTTCT
AAACCACCGT TCCCGGCTTC TGCCGGTGCG TGGGGTAAAC CCACCTGCGT TAACAACGTA
GAAACGCTGT GCAACGTACC TGCCATTATC GAGCATGGCG TGGAGTGGTA TCAGGGGTTG
TCGGCTGGCA AGAGTAAAGA TGCCGGCACC AAACTGATGG GCTTCTCTGG CCGCGTGAAG
AATCCGGGGT TGTGGGAATT GCCGTTTGGG ACCACTGCCC GTGAAATTCT GGAAGATTAT
GCCGGCGGTA TGCGCGATGG TCTGACCCTG AAAGCCTGGC AGCCCGGTGG CGCCGGTACC
GATTTCCTGA CCGATGCACA TCTTGATTTG CCGATGGATT TCGAAAATAT CGGCAAGGCC
GGTAGCCGTC TTGGAACGGC GTTGGCGATG GCGGTCGACA ACGAAATCAA CATGGTATCG
CTGACGCGCA ATCTGGAAGA GTTTTTCGCT CGCGAGTCCT GCGGCTGGTG TACGCCGTGC
CGTGATGGCT TGCCGTGGAG TGTTAAAATT CTACGAGCGC TGGAACGTGG GGAAGGGCAA
CCGGGCGACA TTGAAACGCT GGAGCAACTG TGTCGATTCC TGGGGCCGGG CAACACATTC
TGTGCCCATG CGCCGGGAGC CGTTGAACCG TTGCAAAGCG CCATTAAATA TTTTCGCGAT
GAATTCGAGG CGGGTATCGC CAGACAGGTC GTCAGTAACG CCAAACCGAT TGGCGGTATT
CAACCCAACC TGTTGAAACA GCGCTGGTAA
 
Protein sequence
MSKNIVLTAE QHPLTWRLRA DKQPVWLEEY RSKNGYAGAK KALTGMAQDE VVTLVKDAGL 
RGRGGAGFST GLKWSLMPKD ESMNIRYLLC NADEMEPGTY KDRLLMEQMP HLLVEGMLIG
AYALKAYRGY IFLRGEYVEA AANLRRAIAE ATEAGLLGKN IMGTGFDFEL FVHTGAGRYI
CGEETALINS LEGRRANPRS KPPFPASAGA WGKPTCVNNV ETLCNVPAII EHGVEWYQGL
SAGKSKDAGT KLMGFSGRVK NPGLWELPFG TTAREILEDY AGGMRDGLTL KAWQPGGAGT
DFLTDAHLDL PMDFENIGKA GSRLGTALAM AVDNEINMVS LTRNLEEFFA RESCGWCTPC
RDGLPWSVKI LRALERGEGQ PGDIETLEQL CRFLGPGNTF CAHAPGAVEP LQSAIKYFRD
EFEAGIARQV VSNAKPIGGI QPNLLKQRW