| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1299 |
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| Symbol | |
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| ID | 8118693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1474160 |
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| End bp | 1476310 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644851694 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_003003641 |
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| Protein GI | 251788920 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGGCA AAGGGATAAA AAAAAGCTGG GGGTGGCTGG GCTTAACCGT TCTCCTGCTT
GGCTCGCCAT GTGGCTGGGC CGCTGAATTT TCAGCCAGTT TCAAAGGAAC CGATATTCAG
GAGTTCATCA ACACCGTCAG TAAGAATTTG AACAAAACGG TGATTATCGA CCCAACGGTG
CGCGGTACTA TCAGTGTGCG CAGTTACGAT ATGATGGACG AAGGACAATA CTACCAATTC
TTCCTCAGTG TCCTTGATGT GTATGGTTTT TCGGTGGTGC CGATGGATAA CGGCGTCCTG
AAAGTCATCC GTTCCAAAGA TGCTAAATCG TCGTCGATTC CTCTGGCTAA TAATGAACAA
CCGGGCGTCG GCGATGAACT GGTGACCCGT GTCGTACCGC TCAACAACGT GGCGGCGAGG
GATTTGGCTC CGTTGCTGCG TCAGCTTAAC GATAACGCGG GTGCCGGTAC GGTAGTGCAT
TATGAACCGT CCAACGTCCT GCTGATGACG GGGCGCGCGG CGGTGATCAA GCGGTTGGTC
GATATCGTCA ATACCGTGGA CAAAACCGGT GATCGTGAAA TGATCACCGT GTCATTGACT
TACGCATCGG CGGAAGATGT CGCCAAGCTG GTGAACGATC TCAATAAGAC CGACGAGAAA
AACGCATTGC CAAGCACCAT GCTGGCCAAT GTGGTGGCAG ATGAACGTAC CAACTCGGTG
GTGGTCAGCG GCGAAGAAAA CGCCCGCCAG CGCGCGGTGG AGATGATCCG CCAACTGGAT
CGCAAGCAGG TGGCGCAGGG TGGGACTAAG GTTATCTATC TTAAGTATGC CAAGGCGTTG
GATCTGATCG AAGTACTGGC CGGTAATGGG ACCAGCGGTA ATCGTAATTC ATCGTCGACA
AACTCATCGC GCCCTTCCTC AACGCGTTCG AACAACACGT TAAACAACAG TAACTCCAGT
TCATCCGGCA GTAGTTCCGG CAGTGGTTCA TCGTCATCCT CCTCCAGTTC CAGTATGGGA
TTTGGTTCCG CGTTTGGCTC GGCCAACAGT TCGGGCGGGC GGACGATTGT GATCCAGGGC
AAAGAGGTGA CGGTACGCGC TCATGATCAG ACCAACTCGC TGATCATTAC CGCGCCGCCC
GATATCATGC GTGATCTGGA ACAGGTGATT AATCAACTGG ATATTCGCCG TCCGCAGGTG
CTGGTGGAAG CGATCATCGC CGAAATTCAG GATGCCGATG GTTTGAATCT GGGGATCCAG
TGGGCCAACA AGCGTGCCGG CATGATCCAG TTCCCTAACT CCAACGCCAG CAATAACATA
CCGATCTCTA CCGCGATGAT CGGAACCGAT CAGTTCCGCA GCGACGGTAC GCTGACGACG
GCGTATGCAA ACGCACTGGG TAGCTTCAAT GGTATTACCG CCGGTTTTTA TCGTGGCAAC
TGGTCCATGC TGCTGACGGC ATTGTCCAGC GACGGCAAAA ACGATGTACT GGCGACGCCG
AGTATTGTGA CGCTGGATAA CATGGAAGCG ACCTTCAATG TGGGGCAGGA AGTGCCGGTG
TTGACGGGGC AGCAAACGAC AATGGGGTCT GGTAGCAATA TTTTTAACAC CGTAGAGCGT
AAGACCGTCG GCATCAAACT GCGGGTCAAA CCGCAGATCA ACGAAGGCGA TTCGGTGTTG
CTGCAAATTG AGCAGGAAGT CTCCAGTGTG GCGGAAGGCA ATAGCAGCAC CAACAGTTCG
CTGGGAGTGA CCTTTAATAC TCGTACCGTA AATAACGCTG TGATGGTTAC CAATGGCGAA
ACCGTAGTGG TGGGCGGCCT GCTGGATAAA AGTACCATTG AAACCAATAA CAAAGTTCCG
TTGCTGGGTG ATATTCCGTG GCTGGGCAGC CTGTTTCGTT CTAAAAGCCA GTCGATGAGC
AAGCGCAACC TGATGCTGTT CCTGCGTCCG ACCATTATTC GCGACCCCCA GCAGTATCAG
CAGGCGTCGA TCAGTAAATA CAATTCTTTC AACAACGAGC AGCAACAGCA GCGTGGTCAG
GGTAACTCGG TGCTGGACAA CAACACTCTG CGTTTATCCG GTGGCAATAC CTACACCTTC
CGGCAGGTGC AATCGTCCAT CTCCGCGTTT TATCAGCCGG AGGGGCGATG A
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| Protein sequence | MLGKGIKKSW GWLGLTVLLL GSPCGWAAEF SASFKGTDIQ EFINTVSKNL NKTVIIDPTV
RGTISVRSYD MMDEGQYYQF FLSVLDVYGF SVVPMDNGVL KVIRSKDAKS SSIPLANNEQ
PGVGDELVTR VVPLNNVAAR DLAPLLRQLN DNAGAGTVVH YEPSNVLLMT GRAAVIKRLV
DIVNTVDKTG DREMITVSLT YASAEDVAKL VNDLNKTDEK NALPSTMLAN VVADERTNSV
VVSGEENARQ RAVEMIRQLD RKQVAQGGTK VIYLKYAKAL DLIEVLAGNG TSGNRNSSST
NSSRPSSTRS NNTLNNSNSS SSGSSSGSGS SSSSSSSSMG FGSAFGSANS SGGRTIVIQG
KEVTVRAHDQ TNSLIITAPP DIMRDLEQVI NQLDIRRPQV LVEAIIAEIQ DADGLNLGIQ
WANKRAGMIQ FPNSNASNNI PISTAMIGTD QFRSDGTLTT AYANALGSFN GITAGFYRGN
WSMLLTALSS DGKNDVLATP SIVTLDNMEA TFNVGQEVPV LTGQQTTMGS GSNIFNTVER
KTVGIKLRVK PQINEGDSVL LQIEQEVSSV AEGNSSTNSS LGVTFNTRTV NNAVMVTNGE
TVVVGGLLDK STIETNNKVP LLGDIPWLGS LFRSKSQSMS KRNLMLFLRP TIIRDPQQYQ
QASISKYNSF NNEQQQQRGQ GNSVLDNNTL RLSGGNTYTF RQVQSSISAF YQPEGR
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