Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1276 |
Symbol | |
ID | 8118669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1446268 |
End bp | 1447521 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644851670 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003003618 |
Protein GI | 251788897 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000485827 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA AAACGCTTAC CGCCCTGCTT TTCTCCACCA TGGTGACCGG CCACTTGCTG GCCTTTCCGG TTCATGCCGC ACAGTCGCTG ACCGTTTGGG AAGACATCCA CAAGTCGGAT GGTATCAAGG ATGCCATCGG CGATTTCGAA AAGCAGTTCA ACGTCAAAGT GAACCTGCAG GAAATGCCGT ATGCCCAGCA ACTGGAGAAA TTGCGGTTGG ACGGCCCGGC GGGTATCGGC CCCGATGTGC TGGTGATCCC CAACGATCAA CTGGGCGGCG CGGTGGTGCA GGGGTTGATT GCGCCGCTGA AACTCGATAA GGCCGCGCAA GACAGCTTCA CCGAGGCGTC GATAGCGGCA TTTCGCATGA ACAATCAGGT GTACGGCCTG CCGAAGGCGG TGGAAACCCT GGTGCTGATT TACAACAAAG AGAGAGTAGA CAAGCCGCTG ACCAGCTTGC AGGAGTGGTA TGACTTTTCC AGACAGCAGC AGGCGCAGAG CAAATTCGGG CTGTTGGCGA AGTTCGATCA GATCTACTAC AGCTGGGGAG CGATCGGGCC GATGGGCGGC TATATCTTTG GTAAAAACGA CAAAGACCCC GGTAAAAACG ACAAAGGCGG CCTTAACCCG CTGGATATCG GCCTGAATAC GCCGGGTGCG GTGGAAGCGG TGACGCTGCT GCGCAAATTC TACGCCGACA AGCTGTTCCC GGCGGGGATC ATCGGCGATA ACGGGCTGAA CGCCATCGAT TCGTTGTTTA CCGAGAAAAA AGCGGCGGCG GTGATCAACG GCCCCTGGGC ATTCCAGCCC TATGAAGCGG CCGGCATTCA TTATGGCGTA GCGCCGCTGC CGTTGCTGCC GGATGGCAAG CCGATGAGCT CGTTCCTCGG CGTGAAAGGG TATGTGGTAT CGACCTGGAG CAAGGATAAC GCGCTGGCAC AGCGCTTTAT CGAATTCATC AATCAGCCGC GTTATGTGAA GGTCCGCTAC CAGCGTACCG GCGAGATCCC GCCGCAAAAA AGCATGATTG ACGATCCGCT GATTAAAAAC GACGAGAAGG CCAGCGCGGT CGCCATCCAG GCCGCCCACG CCGTGCCGAT GCCGGGCATT CCGGAAATGG GCGAAGTCTG GGGGCCGGCC AACGCGGCGC TGGAGCTGAG TATGACCGGC AAGCAAGAGC CGAAAGCGGC GCTCGATAAC GCGGTGAAGC AAATCAAGAT GCAGGTCGAA GCGATGCAGG CCAGCAATCA GTAA
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Protein sequence | MKTKTLTALL FSTMVTGHLL AFPVHAAQSL TVWEDIHKSD GIKDAIGDFE KQFNVKVNLQ EMPYAQQLEK LRLDGPAGIG PDVLVIPNDQ LGGAVVQGLI APLKLDKAAQ DSFTEASIAA FRMNNQVYGL PKAVETLVLI YNKERVDKPL TSLQEWYDFS RQQQAQSKFG LLAKFDQIYY SWGAIGPMGG YIFGKNDKDP GKNDKGGLNP LDIGLNTPGA VEAVTLLRKF YADKLFPAGI IGDNGLNAID SLFTEKKAAA VINGPWAFQP YEAAGIHYGV APLPLLPDGK PMSSFLGVKG YVVSTWSKDN ALAQRFIEFI NQPRYVKVRY QRTGEIPPQK SMIDDPLIKN DEKASAVAIQ AAHAVPMPGI PEMGEVWGPA NAALELSMTG KQEPKAALDN AVKQIKMQVE AMQASNQ
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