Gene Dd1591_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1270 
Symbol 
ID8118663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1439526 
End bp1440740 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content56% 
IMG OID644851664 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003003612 
Protein GI251788891 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.525682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTA TTAGCGCAGA GGTGTTTGTC ACCTGTCCAG GACGTAATTT CGTTACGCTG 
AAAATCACCA CCGACAGTGG CATCACCGGT ATTGGCGACG CCACCCTGAA CGGACGCGAG
CTCTCGGTGG CGTCTTACCT GAAGGATCAC ATTTGCCCGC AGTTGATCGG CCGCGATGCC
CGGCAGATCG AAGACATCTG GCAATATTTC TATAAAGGCG CCTACTGGCG CCGCGGCCCG
GTCACCATGT CGGCGATTTC CGCCGTGGAT ATGGCGCTCT GGGATATCAA AGGTAAAGAG
GCGAACATGC CGCTCTACCA GTTACTGGGC GGCGCTTCCC GCAGCGGCGT GATGGTGTAT
TGCCACACAA CCGGACATTC CATCGACGAG GTGCTGGAAG ACTATGCCCG ACACCGCGAC
CAGGGTTTCA AGGCGATTCG GGTACAGTGC GGCATTCCGG GGATGAAAAC CACCTACGGC
ATGGCGAAAG GCAAAGGGCT GTCGTACGAA CCCGCCACCA AAGGTGACTG GCCGGAAGAG
CAGATCTGGT CAACGGAGAA ATACCTCGAC TTCATGCCTA ACCTGTTTGA AGCCGTACGC
AGCAAATTTG GTTTTGATGA GCACTTGCTG CACGACATGC ACCACCGCCT GACACCGATT
GAAGCGGCAC GCTTCGGCAA AAGCGTGGAG CCCTACCGGT TGTTCTGGAT GGAAGACCCG
ACGCCGGCCG AAAATCAGGC GTGCTTCCGT CTGATTCGCC AGCATACCGT CACACCGATC
GCGGTTGGTG AAGTGTTCAA CAGCATCTGG GATTGTAAGC AACTGATTGA AGAGCAGTTG
ATCGATTACA TCCGCACGAC CATCACCCAC GCAGGCGGCA TCACCGGTAT GCGCCGTATC
GCCGACTTTG CCTCGCTGTA TCAGGTTCGT ACCGGATCGC ACGGCCCGTC GGATCTTTCG
CCTATCTGCA TGGCCGCCGC GTTGCATTTC GATCTCTGGG TGCCGAATTT CGGTATTCAG
GAATTCATGG GGTATTCCGA ACAGATGCTG GACGTGTTCC CGCATAGCTG GACGTTTGAA
GACGGCTATA TGCACCCCGG CGACAAACCC GGTTTGGGAA TCGAATTTGA CGAAAAACTG
GCGGCCAAAT ACCCCTATGA ACCCGCCTAT CTGCCGATTG CCCGTCTGGA AGACGGCACG
CTGTGGAACT GGTAA
 
Protein sequence
MKIISAEVFV TCPGRNFVTL KITTDSGITG IGDATLNGRE LSVASYLKDH ICPQLIGRDA 
RQIEDIWQYF YKGAYWRRGP VTMSAISAVD MALWDIKGKE ANMPLYQLLG GASRSGVMVY
CHTTGHSIDE VLEDYARHRD QGFKAIRVQC GIPGMKTTYG MAKGKGLSYE PATKGDWPEE
QIWSTEKYLD FMPNLFEAVR SKFGFDEHLL HDMHHRLTPI EAARFGKSVE PYRLFWMEDP
TPAENQACFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTITH AGGITGMRRI
ADFASLYQVR TGSHGPSDLS PICMAAALHF DLWVPNFGIQ EFMGYSEQML DVFPHSWTFE
DGYMHPGDKP GLGIEFDEKL AAKYPYEPAY LPIARLEDGT LWNW