Gene Dd1591_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1265 
Symbol 
ID8118658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1432023 
End bp1433714 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content62% 
IMG OID644851659 
Producturocanate hydratase 
Protein accessionYP_003003607 
Protein GI251788886 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA CATCTTCAAC GACGTCAGCT GTTGCCCGTA TCGTTCGCGC GCCGCACGGC 
ACCGAACTGC ATTGTGAAAA CTGGCTGATC GAAGCCGCCT ACCGCATGAT CCAGAACAAC
CTCGACCCGG ATGTGGCCGA GCGTCCGGAG GATCTGGTGG TGTATGGCGG CATCGGCAAA
GCCGCCCGCA ACTGGGTGTG CTTCGACGCG ATCCTTGCCA GCCTGCGCCA ACTGAAAGCG
GATGAAACGC TGCTGGTGCA ATCGGGCAAA CCGGTCGGGG TGTTTCGCAC CCACGGCGAC
GCCCCGCGCG TATTGATTGC CAACTCCAAT CTGGTGCCGC ATTGGGCCAC CTGGGAACAC
TTCCATGAGC TGGATAAAGC CGGGCTGATG ATGTACGGCC AGATGACCGC CGGATCGTGG
ATTTATATTG GCGCGCAGGG CATCGTGCAG GGGACTTATG AAACCTTCGC CGAAGCCGGC
CGTCAGCATT ATCACGGCGA TCTGAGCGGC AAATGGATCC TCACCGCCGG TCTTGGCGGT
ATGGGCGGCG CTCAACCGCT GGCCGGTGTG TTGGCCGGTG CCAGCGTGCT GGCGGTGGAG
TGTCAGGAAT CCCGCATCGA TTTTCGGTTA CGTACCCGTT ATCTCGACTA TAAAGCCGGC
AACCTTGACG AGGCGCTGGC GATCATCGCC GATGCCTGCG CGCAAAAGAA AGCCGTTTCC
GTCGGCCTGC TCGGCAACGC CGCCGAGGTG CTGCCGGAAC TGGTGAAACG CGCCAAAGCG
GGCGGCATGA AACCGGATAT CGTCACCGAC CAGACCTCCG CTCATGACCC GCTCAACGGC
TACCTGCCGG CCGGCTGGAG CGTGGCGCGC TGGCAGCAGG AGCGAATCAG CAACCCAGAG
GCGGTAATGA AAGCCGCCTG CGCCTCAATG GCGGTGCATG TGCAGGCGAT GCTGGATTTT
TGCCACATGG GCGTGCCCAC CGTGGATTAC GGCAACAATA TCCGCCAGCG TGCGTTTGAT
GAAGGTGTAC GTAACGCCTT TGATTTTCCC GGCTTCGTCC CGGCCTATAT CCGCCCGCTG
TTTTGCGAAG GCAAAGGGCC GTTCCGTTGG GTGGCGCTGT CCGGCGACCC GGAAGATATC
TACAAAACCG ACGCCAAACT GAAAGCACTG TTCCCGGATA ATCATCACCT GCACCGCTGG
CTGGACATGG CGCGCGAGCG CATCGCCTTT CAGGGGTTGC CGTCGCGCAT CTGCTGGCTG
GGGCTGGGAG AACGGCATCT GGCCGGGCTG GCGTTCAACG AGATGGTGCG TAACGGTGAG
CTGAAAGCGC CGATCGTTAT CGGCCGCGAC CATCTGGATT GCGGTTCGGT GGCATCGCCT
AACCGGGAAA CGGAAGCGAT GCAGGACGGC TCGGACGCGG TATCCGACTG GCCGTTGCTC
AACGCGCTGC TGAATACGGC GGGCGGCGCG ACCTGGGTGA GTTTGCACCA CGGCGGCGGC
GTCGGCATGG GCTTTTCCCA ACATGCCGGG ATGGTGATCG TCTGCGACGG CAGCGAACAG
GCCGACGCCC GGCTGGCGCG GGTGCTGTGG AACGACCCGG CCACCGGCGT GATGCGCCAC
GCCGACGCCG GTTACGAGGT TGCCACCGCC TGTGCGGAAG AGCATCGGTT GAATTTGCCG
ATGGTGAAAT AG
 
Protein sequence
MTTTSSTTSA VARIVRAPHG TELHCENWLI EAAYRMIQNN LDPDVAERPE DLVVYGGIGK 
AARNWVCFDA ILASLRQLKA DETLLVQSGK PVGVFRTHGD APRVLIANSN LVPHWATWEH
FHELDKAGLM MYGQMTAGSW IYIGAQGIVQ GTYETFAEAG RQHYHGDLSG KWILTAGLGG
MGGAQPLAGV LAGASVLAVE CQESRIDFRL RTRYLDYKAG NLDEALAIIA DACAQKKAVS
VGLLGNAAEV LPELVKRAKA GGMKPDIVTD QTSAHDPLNG YLPAGWSVAR WQQERISNPE
AVMKAACASM AVHVQAMLDF CHMGVPTVDY GNNIRQRAFD EGVRNAFDFP GFVPAYIRPL
FCEGKGPFRW VALSGDPEDI YKTDAKLKAL FPDNHHLHRW LDMARERIAF QGLPSRICWL
GLGERHLAGL AFNEMVRNGE LKAPIVIGRD HLDCGSVASP NRETEAMQDG SDAVSDWPLL
NALLNTAGGA TWVSLHHGGG VGMGFSQHAG MVIVCDGSEQ ADARLARVLW NDPATGVMRH
ADAGYEVATA CAEEHRLNLP MVK