| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1160 |
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| Symbol | |
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| ID | 8118712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1322501 |
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| End bp | 1326772 |
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| Gene Length | 4272 bp |
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| Protein Length | 1423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644851557 |
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| Product | YD repeat protein |
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| Protein accession | YP_003003506 |
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| Protein GI | 251788785 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00301652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACG ATATTCTGAG CCGGGTGGCC CGGGTGGGGG CCATGCATGC CGGAAACCGT
CCCAACCCGC CCGCCGACCG GCCGCAGCCC TGTCAGGGTA AACCGCCAAC GTCGCCGGGC
AAGACCATCA AGCACAAGAG TTTCCTCGGC GCACTGGCCG GTGCCGTGGC CGGGGCGCTG
GTGGCAGCGG CCGTCGCGGC GGCGGCAGTG TTTCTGGTCG GTGTCACCGG CGGGCTGGCA
GTGGCGGCCG TCGGGGCACT GGCGGTGTTT GCTGCCGGTG ACCTGATTTC CGCCGTCACC
AACAAGGTCT CGGCGATGGT GGACAGTGCG TCACCGGCCT TCGGGCCGGT GGCGTCCGGC
TCGGGTAACG TGTTTGTCGA AAAACAGCCG GTCGCCCGCG CCACGAAAGA CACCGTCGCC
TGCACCAAGC ACAACAGCCC GCAACTGATT GCCCAGGGCA GCGAGTCGGT ATTTGTGAAC
GACGCGCCGG CCGCCCGTAT CGATGATAAA ACCGTGTGTG GCGCCACTAT CAAGGAAGGC
GCCTCGACGG TCTTTTTCGG CTCCGGGCAG GGCACCTATC TGGACATCGC CGACGAGTTC
AGTTGGTGGG AAAAAGCGTT GCTGATTGCG GTGGAGTTTC TGGTGCCACC CAGCCGGGGT
ATGTTGAAGG GACTGGGAAA GCTGTTTATC CGTGGTCCCA AGGCAGTACT ACGCGGATCC
AGAGCAGGGG CAAAGTGGAT TGCCGGTCGC CTCGCGGATA AATCATCTTG TGCCAGTCAG
GCTTTCAAAG CCAGCAGTGG GCTGACGCGC GTCAAGGCAG CAGTAAAGGC GTTCCTGAAA
GACCCGGTTT ATATCGCCAG CGGCGAGGTG ATTGAATCCC GTACCGATAT CGCACTGGGC
CAGACGCTGC CGCTGGTGTT CGAACGCACC TACCGCTCCG CCTCCGGGCA TGTCGGGCTG
CTGGGCCGCG GCTGGCACGA CAGCTGGAGC GAGGTGGCGA CGGTAACGCG CGACGGCCTC
AACACCCACG TGGTCATCAC GCTGGCACAG GGCTACGACA TCGATTTTAC CTTCCATCAG
GACGTACAGG CGGTGTACTG CCCGCACTAC CCTGAATTTA CCCTGCACCG CCGGGGCGAG
GGTTTCAGCC TGTGGCACCG CGACCAGCAG ACCTGGCGCG ACTTTAGCGT GGTGCAGGGC
GAGCGATGGT TGCTGTCGGC CATTCACGAT AGCCACGACA ACCGCATCGA GCTGGTGCGC
GACCCGAAAG GCTACCTGCG CCAGGTGCGC CACAGCGACG GCGTCACCCT GCTGCTGGTG
TGGCGGGGCG AATTCCTGCA CCAGATACAA CGTATCGATG GCGGCCAGAA GACGTTGCTG
GCCGGGTACC GCCAGGACGA ACAGGGCCGA CTGGTGGAAG CGGACGCCAC CCACGCCTAT
CACCTCTATT ACGAGTACGA CGCGGCCCAT CGGCTGACCC GCTGGCACGA TAACGACCAG
ACCTGGGCGC GCTACGAATA CGACGCACAG GGGCGCTGCG TCTACACCAC CTGCGCCGAC
GGTTTTCTGA CCGCCCGCTT CGACTACCTG CCCGACCGGG TGGTGATGAC CGACGGCCTC
GGCCAGCGCA GCGAATTCGG CTTTAACGAC CTGCACCTGA TGAGCTGGGA ACAATCCCCG
CTCGGCCACG TCACCCGCTA CGAGTACGAC GAGGTTGGCA ACCTGCTGCG GGAAATCTCG
CCCGCCGGGC GGGTGGTCGA ATTCGGCTAT CTGGACGATA CCGGGCGGGT CAGCACCTTT
ACCGACGCCA GCGGCCACCA GTGGCAGTAC GCCTACGACG ACGAGCAGCG GCTGTGCGGC
GTCACCGACC CGCTGGGCCG CGAGTGGGGC TGGGCGTATG ACGCCGAGGG TAACCCGGAA
CGGCTGACCG GCCCGGATGC CAGCGAGGTC CGATTCACCT GGAACCGCTA TGGCCTGCTG
ACCCAGGTCA GCGACGCCGC CGGTGAGGTG CAGGCGCGGT TACAGTACGA CCACCGTCAG
CGGCTGCTGA GTGCCACCGA CGCCGAGAGC CGCACCCGGC AGTTACGCTA CGACGGGCAG
GACCGGGTGG TGCAGTGGCA ACGGGCGGAC GGTGCCCGTT TCCGGCTCGG CTACCGCCGG
GCCAGCTGGA CGCTGCCGGA GCAGCTGATA CGCCCGGACG ACAAGGAAGA GCAGCGCCAG
TACGACCGCC ACAACAACCT GCTGAGCTAC GTGGACGGCA ACGGCGCATT GTGGCGTCAG
ACCTTCGGGC CGTTCGACCT GCTGACCGCA CGCACCGACG CCGAAGGCCG CACCTGGCAC
TACGCGTACG ATAAAGAGAG CCAGCAACTG ACAACGGTTA TCGCCCCGGA CGGCAGCCGC
TGGCAGTGGT GGCTGGATGC CGACGGGCGG GTCATCCGCG AGCGTGACAT GACCGGCACC
GAGACGCATT ACGGCTACGA CGAGGACGGC CTGTGCATCA GCGTGCGCAA CGGCGAAGGC
GACACCCGCC ACTTCCTCTA CGACGCCCGC GGCCTGCTGT TGCGTGAAAC CGCGCCGGAC
GACACCCTGC ACTACCGGTA CGATGCGGTG GGCCGCCTGA CCGAGGTCTC GTCAGCCACC
GCCCATGTGC AACTGGACTA CGACCTGCGC GACCGGGTGG TGCGTGAATG GCACAACGGC
ACACTGCTCA CCCGCCAGTA CGACGACACG GCCCGCACCG TCACCCGCAC CCTGACCTGG
GACGGCGACG CCGGGGACAC CACCGGTACC CTCGCGCCGC TCACCAGTCT GTTCCATTAC
ACCCGCACCG GCGAGCTGCG GCAGGTGCAG TTGCCGGACG GTGCCGACCT GACCCTGACC
CAGGACGCAG CGGGCCGCGA GTCACACCGT CGCGGCGGCA GCGGCTTTGT GCAGCAGCGG
GAATACGACG TGATGGGCTG GCTGACGCGG GAGATGAGCG GCGCACAGCA CGACGGCCAC
CTGCTGGCCG CACAGACGCG GGAATACCGC TACGACGGTG CCGGTAACCT GACCGGGGTG
CGTCACAACC GCGACGCCGA AGGTTATCGT CTGGACGCCA CCGGCCGGGT GCAGGCAGTG
CTGAGCGGCG GTGCGGGCAA ACCGGTGGAC ACCCTCGCCC GCTTCCACTA CACCCGCACC
GGTCTGCCGC AGGAGGCAGG CCGCCTCACC GAGTGGCAGT CTGGCCGACT GGTTCAGCAC
GATGACACCC ATTACCAGTA TGACAGGGCC GGACGGCTTA TCCGTAAACA GGTGGTGCAG
CCGGGCTACC GCCCGCAGGT GTGGCAGTAC CGCTGGGACA GCCGCAACCA GCTGCGGGTG
GTGGATACCC CGAGCGGCGA ACGCTGGCTG TACCGTTACG ACCCGTTTGG CCGCCGGGTG
GGCAAACGCT GCGACCAGAA AGCCGAAGAA ATTCGCTACC AGTGGGACGG CGACCAGATA
GCGGAAATCC GCCACTACCG CCACGGCCAG CTCGTGGCCC GCCGCCACTG GGTCTACAAC
GGCTGGGAGC TGGTGGTACA GCAGCGCCAG CACACCGGCG GCGACTGGGA AACGGATTTT
GTGACCAGCA GCCAGAACAG TACCCCGCAG GCGCTGTTCA CACCGGACGG CACCCTGCGC
TGGCAGGCAC CGAAAGCCAC GCTGTGGGGC CAGCGCCAGG CAGAAAAATC GGAAAGTCCG
GACCCCGGTC TGGCCTTCGC CGGGCAGCTC CGTGACAGCG AAAGCGGGCT GTGCTATAAC
CGCTTTCGGT ACTACGACCC GGCCGGTGGG TGTTATGTGT CGCCGGACCC GATAGGGATA
GCGGGTGGGG ATAATAACTA CGCTTACGCG CCGAATCCGA TTACCTGGAT CGACCCGCTG
GGGCTGGCTG GGTGCTCCAT TCAGAAATTA GAAGAAAAAG GGTTTACTGG AGTTAAGTCA
ACTAAGAATG GTGGACTAGA TTATGCCAAT AGCAACGCTT TATATTCAAA AGAAGGTGTG
AATCCAATAC GGCGGATTGA ATATACGGGT AATTATCACA AAGATTTTGA GCAGGCTAAC
ATGGCCGTTT TAGGACGAAA AACTACGCCT AAAGGCTATG TGTGGCACCA TTTAGATGAT
TATGATCCGG TAACAAATAC AGGCACTATG CAACTGGTTC AACAGGCTGC CCATAAAGGT
ATTCCGCATG TTGGCGGGGT AAGTCAATAT CAAAATATTA CGGGATTGAA ATATATTTTC
AAAATATGGT GA
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| Protein sequence | MLNDILSRVA RVGAMHAGNR PNPPADRPQP CQGKPPTSPG KTIKHKSFLG ALAGAVAGAL
VAAAVAAAAV FLVGVTGGLA VAAVGALAVF AAGDLISAVT NKVSAMVDSA SPAFGPVASG
SGNVFVEKQP VARATKDTVA CTKHNSPQLI AQGSESVFVN DAPAARIDDK TVCGATIKEG
ASTVFFGSGQ GTYLDIADEF SWWEKALLIA VEFLVPPSRG MLKGLGKLFI RGPKAVLRGS
RAGAKWIAGR LADKSSCASQ AFKASSGLTR VKAAVKAFLK DPVYIASGEV IESRTDIALG
QTLPLVFERT YRSASGHVGL LGRGWHDSWS EVATVTRDGL NTHVVITLAQ GYDIDFTFHQ
DVQAVYCPHY PEFTLHRRGE GFSLWHRDQQ TWRDFSVVQG ERWLLSAIHD SHDNRIELVR
DPKGYLRQVR HSDGVTLLLV WRGEFLHQIQ RIDGGQKTLL AGYRQDEQGR LVEADATHAY
HLYYEYDAAH RLTRWHDNDQ TWARYEYDAQ GRCVYTTCAD GFLTARFDYL PDRVVMTDGL
GQRSEFGFND LHLMSWEQSP LGHVTRYEYD EVGNLLREIS PAGRVVEFGY LDDTGRVSTF
TDASGHQWQY AYDDEQRLCG VTDPLGREWG WAYDAEGNPE RLTGPDASEV RFTWNRYGLL
TQVSDAAGEV QARLQYDHRQ RLLSATDAES RTRQLRYDGQ DRVVQWQRAD GARFRLGYRR
ASWTLPEQLI RPDDKEEQRQ YDRHNNLLSY VDGNGALWRQ TFGPFDLLTA RTDAEGRTWH
YAYDKESQQL TTVIAPDGSR WQWWLDADGR VIRERDMTGT ETHYGYDEDG LCISVRNGEG
DTRHFLYDAR GLLLRETAPD DTLHYRYDAV GRLTEVSSAT AHVQLDYDLR DRVVREWHNG
TLLTRQYDDT ARTVTRTLTW DGDAGDTTGT LAPLTSLFHY TRTGELRQVQ LPDGADLTLT
QDAAGRESHR RGGSGFVQQR EYDVMGWLTR EMSGAQHDGH LLAAQTREYR YDGAGNLTGV
RHNRDAEGYR LDATGRVQAV LSGGAGKPVD TLARFHYTRT GLPQEAGRLT EWQSGRLVQH
DDTHYQYDRA GRLIRKQVVQ PGYRPQVWQY RWDSRNQLRV VDTPSGERWL YRYDPFGRRV
GKRCDQKAEE IRYQWDGDQI AEIRHYRHGQ LVARRHWVYN GWELVVQQRQ HTGGDWETDF
VTSSQNSTPQ ALFTPDGTLR WQAPKATLWG QRQAEKSESP DPGLAFAGQL RDSESGLCYN
RFRYYDPAGG CYVSPDPIGI AGGDNNYAYA PNPITWIDPL GLAGCSIQKL EEKGFTGVKS
TKNGGLDYAN SNALYSKEGV NPIRRIEYTG NYHKDFEQAN MAVLGRKTTP KGYVWHHLDD
YDPVTNTGTM QLVQQAAHKG IPHVGGVSQY QNITGLKYIF KIW
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