Gene Dd1591_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1093 
SymbolglyA 
ID8118245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1264831 
End bp1266084 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID644851495 
Productserine hydroxymethyltransferase 
Protein accessionYP_003003444 
Protein GI251788723 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGC GTGAAATGAA CATTGCCGAT TACGATGCCG AGCTATGGCA AGCAATGCAG 
CAAGAAGTGG TGCGTCAGGA AGAGCACATT GAACTGATTG CGTCAGAAAA CTATACCAGT
CCACGCGTCA TGCAGGCCCA GGGGTCTCAG CTGACCAACA AATACGCCGA AGGGTATCCG
GGCAAACGCT ACTACGGCGG TTGCGAATAC GTCGACGTGG TTGAACAGCT GGCTATCGAT
CGCGCTAAAG AACTGTTCGG CGCCGATTAT GCCAACGTTC AGCCGCACTC CGGTTCTCAA
GCTAACTTCG CCGTCTATAC TGCATTGCTG CAGCCGGGCG ACACCATTCT GGGTATGAAT
CTGGCGCACG GCGGCCACTT GACTCACGGC TCTCCGGTTA ACCTGTCCGG TAAGCTGTAT
AACGTCGTGC CTTACGGCAT TGATGAGAGC GGCAAAATCA ACTACGACGA AATGGCCGAA
CTGGCGCGCA CTCACAAGCC GAAAATGATC GTGGGCGGCT TCTCTGCGTA TTCCGGCATC
GTTGACTGGG CGAAGATGCG TGAAATCGCC GACAGCATCG GCGCTTATTT GTTCGTCGAC
ATGGCGCACG TCGCCGGTCT GATCGCTGCC GGCGTTTACC CTAACCCGGT TCCGCACGCA
CACATCGTGA CCACCACTAC CCACAAAACG CTGGCCGGTC CGCGTGGCGG CTTGATCCTG
GCCAAAGGCG GCGACGAAGA ACTGTACAAG AAACTGAATT CCGCCGTATT CCCGGGCGGT
CAGGGCGGCC CGCTGATGCA TGTTATCGCG GGTAAAGCTG TAGCGCTGAA AGAAGCGATG
GAGCCGGAAT TCAAAACTTA CCAGCAGCAG GTAGCGAAAA ACGCCAAGGC GATGGTGGAA
GTGTTCCTGT CCCGCGGTTT CAACGTGGTG TCCGGCGGTA CTGAAAACCA CCTGTTCCTG
CTGGATCTGG TCAGCAAGAA CTTGACCGGT AAAGAAGCTG ACGCCGCGCT GGGCCGTGCC
AATATCACCG TAAACAAAAA CAGCGTGCCG AACGATCCGA AGAGCCCGTT CGTGACCTCC
GGCATCCGTA TCGGTACGCC GGCGGCCACC CGCCGCGGCT TCAAAGAAGC GGAAGTCCGT
GAACTGGCCG GCTGGATTTG CGATGTGCTG GACAACATCA ATGACGAAGC CGTTATCGAG
CGCGTCAAAC AGCAAGTGCT GGATATCTGC GCCCGTTTCC CGGTTTACGC CTGA
 
Protein sequence
MLKREMNIAD YDAELWQAMQ QEVVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDVVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL QPGDTILGMN
LAHGGHLTHG SPVNLSGKLY NVVPYGIDES GKINYDEMAE LARTHKPKMI VGGFSAYSGI
VDWAKMREIA DSIGAYLFVD MAHVAGLIAA GVYPNPVPHA HIVTTTTHKT LAGPRGGLIL
AKGGDEELYK KLNSAVFPGG QGGPLMHVIA GKAVALKEAM EPEFKTYQQQ VAKNAKAMVE
VFLSRGFNVV SGGTENHLFL LDLVSKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS
GIRIGTPAAT RRGFKEAEVR ELAGWICDVL DNINDEAVIE RVKQQVLDIC ARFPVYA