| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0993 |
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| Symbol | trmD |
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| ID | 8121140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1144101 |
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| End bp | 1144856 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644851384 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_003003345 |
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| Protein GI | 251788624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.266171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGATTG GGGTGATTAG CCTATTTCCT GAGATGTTTC GCGCCATTAC TGATTATGGA
GTCACTGGCC GGGCAGTAAA AAATGGCCTA CTGAGCGTAC AGTACTGGAG TCCTCGCGAC
TTCACTTACG ATCGACATCG CACGGTGGAC GATCGCCCTT ATGGCGGCGG TCCCGGTATG
TTGATGATGG TGCAGCCCTT GCGGGATGCT ATCCATGCAG CGAAAGCAGC GGCAGGCGAA
GGGGCTCGGG TGATTTATCT ATCACCGCAG GGTCGCAAAC TGGATCAGCA AGGCGTACGT
CAACTCGCTG CAAATCAGAA GATGATTCTG GTTTGCGGAA GGTACGAGGG CATTGATGAG
CGAGTCATTA AAACCGAAAT TGACGAAGAA TGGTCAATCG GCGACTACGT TCTCAGTGGT
GGCGAACTGC CGGCAATGAC GCTGATTGAT TCGGTTGCCC GGTTTATCCC CGGCGTACTG
GGTCATGAGG CTTCGGCACA GGAAGATTCT TTTGCCGATG GATTGCTGGA CTGTCCTCAC
TATACCCGGC CTGAAGTGTT GGAAGGCATG GATGTACCGG CAGTATTGTT GTCGGGCAAT
CATGCGGAAA TACGCCGCTG GCGTTTGAAG CAGTCGCTGG GCCGAACCTG GCTTAGAAGA
CCTGAACTTC TGAAAAGCCT AGCTCTGACT GACGAGCAAG CAACGTTGTT GACTGAGTTC
CAACGGGAAT ATCAGTCTGG GCAACACGAG TATTAG
|
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| Protein sequence | MWIGVISLFP EMFRAITDYG VTGRAVKNGL LSVQYWSPRD FTYDRHRTVD DRPYGGGPGM
LMMVQPLRDA IHAAKAAAGE GARVIYLSPQ GRKLDQQGVR QLAANQKMIL VCGRYEGIDE
RVIKTEIDEE WSIGDYVLSG GELPAMTLID SVARFIPGVL GHEASAQEDS FADGLLDCPH
YTRPEVLEGM DVPAVLLSGN HAEIRRWRLK QSLGRTWLRR PELLKSLALT DEQATLLTEF
QREYQSGQHE Y
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